Variant report

Variant	rs12464573
Chromosome Location	chr2:76494928-76494929
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 12 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:11)

rs_ID	r²[population]
rs10519328	0.96[AFR][1000 genomes];0.90[ASN][1000 genomes]
rs11126513	0.96[AFR][1000 genomes];0.88[AMR][1000 genomes];0.90[ASN][1000 genomes]
rs12621680	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs17012460	0.92[AFR][1000 genomes];0.89[ASN][1000 genomes]
rs4853216	0.85[ASN][1000 genomes]
rs62165108	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs62166161	0.96[AFR][1000 genomes];0.89[ASN][1000 genomes]
rs62166162	0.92[AFR][1000 genomes];0.89[ASN][1000 genomes]
rs62166163	0.86[ASN][1000 genomes]
rs62166164	0.86[ASN][1000 genomes]
rs62166166	0.86[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv874312	chr2:76430941-76500077	Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS Active TSS	TF binding region Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:76492400-76505200	Weak transcription	Fetal Muscle Leg	muscle

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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