Variant report

Variant	rs11128087
Chromosome Location	chr3:68752713-68752714
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 20 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:17)

rs_ID	r²[population]
rs1504297	0.94[AMR][1000 genomes];0.95[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs1602195	0.86[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs2221394	0.94[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs2313851	0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4855498	0.94[AMR][1000 genomes];0.95[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs4855499	0.94[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6549141	0.88[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs6549143	1.00[CEU][hapmap];1.00[CHB][hapmap];0.85[JPT][hapmap]
rs6775453	0.88[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs6795777	0.82[EUR][1000 genomes]
rs6796615	0.86[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs867310	0.90[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs9681520	0.88[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs9682904	0.83[AMR][1000 genomes]
rs971382	0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9836496	0.92[AMR][1000 genomes];0.92[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs9841811	0.89[AMR][1000 genomes];0.91[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv3863	chr3:68720921-68769064	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
2	nsv508224	chr3:68724528-68762976	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
3	nsv236	chr3:68733871-68757344	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:68752000-68753000	Enhancers	Fetal Muscle Leg	muscle

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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