Variant report

Variant	rs11128088
Chromosome Location	chr3:68752815-68752816
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 16 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:13)

rs_ID	r²[population]
rs11128103	1.00[YRI][hapmap]
rs11708245	0.93[ASN][1000 genomes]
rs13084200	0.82[EUR][1000 genomes]
rs1504295	0.92[AFR][1000 genomes];0.92[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs1504296	0.91[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs17048119	1.00[YRI][hapmap]
rs6764338	0.82[AFR][1000 genomes]
rs6772391	0.82[EUR][1000 genomes]
rs7614404	0.92[AFR][1000 genomes];0.97[EUR][1000 genomes]
rs971381	0.95[AFR][1000 genomes];0.91[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs9826485	0.97[AFR][1000 genomes];0.95[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs9878555	0.95[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs9878718	0.95[AMR][1000 genomes];0.99[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv3863	chr3:68720921-68769064	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
2	nsv508224	chr3:68724528-68762976	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
3	nsv236	chr3:68733871-68757344	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:68752000-68753000	Enhancers	Fetal Muscle Leg	muscle

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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