Variant report

Variant	rs11158801
Chromosome Location	chr14:69753772-69753773
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr14:69753330..69756214-chr14:69863394..69865238,2	MCF-7	breast:
2	chr14:69748078..69749756-chr14:69753267..69755131,2	MCF-7	breast:

Variant related genes	Relation type
ENSG00000029364	Chromatin interaction
ENSG00000100632	Chromatin interaction

Extended variants
information (count: 7 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:7)

rs_ID	r²[population]
rs12437334	1.00[CHB][hapmap];1.00[JPT][hapmap];0.97[ASN][1000 genomes]
rs12890931	1.00[CHB][hapmap];1.00[JPT][hapmap];0.98[ASN][1000 genomes]
rs1890941	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.82[YRI][hapmap];0.82[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs7140574	0.98[ASN][1000 genomes]
rs7141942	0.96[ASN][1000 genomes]
rs7143336	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs954411	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.86[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:23 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:69730800-69754000	Weak transcription	Brain Anterior Caudate	brain
2	chr14:69735800-69771600	Weak transcription	Fetal Intestine Small	intestine
3	chr14:69738200-69758200	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
4	chr14:69740400-69754400	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
5	chr14:69745000-69753800	Weak transcription	Fetal Muscle Trunk	muscle
6	chr14:69747200-69753800	Weak transcription	Fetal Muscle Leg	muscle
7	chr14:69748200-69753800	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
8	chr14:69749000-69753800	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
9	chr14:69749000-69758000	Weak transcription	Fetal Heart	heart
10	chr14:69749200-69754200	Weak transcription	Left Ventricle	heart
11	chr14:69750200-69760600	Weak transcription	Pancreas	Pancrea
12	chr14:69751200-69753800	Weak transcription	Right Atrium	heart
13	chr14:69753000-69754000	Weak transcription	Liver	Liver
14	chr14:69753000-69754600	Weak transcription	HepG2	liver
15	chr14:69753600-69753800	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
16	chr14:69753600-69753800	Enhancers	Duodenum Mucosa	Duodenum
17	chr14:69753600-69755200	Enhancers	Right Ventricle	heart
18	chr14:69753600-69755200	Enhancers	NHLF	lung
19	chr14:69753600-69755400	Enhancers	Cortex derived primary cultured neurospheres	brain
20	chr14:69753600-69755400	Enhancers	Adipose Nuclei	Adipose
21	chr14:69753600-69755400	Enhancers	Fetal Adrenal Gland	Adrenal Gland
22	chr14:69753600-69755400	Enhancers	Stomach Smooth Muscle	stomach
23	chr14:69753600-69759400	Enhancers	NHDF-Ad	bronchial

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