Variant report

Variant	rs7140574
Chromosome Location	chr14:69751282-69751283
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 7 )
Associated
traits (count: 2 )

rSNPs within LD-proxies of this variant (count:7)

rs_ID	r²[population]
rs11158801	1.00[CHB][hapmap];1.00[JPT][hapmap];0.98[ASN][1000 genomes]
rs12437334	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs12890931	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1890941	1.00[CHB][hapmap];0.97[CHD][hapmap];1.00[JPT][hapmap];0.98[ASN][1000 genomes]
rs7141942	0.90[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7143336	1.00[CHB][hapmap];0.97[CHD][hapmap];1.00[JPT][hapmap];0.98[ASN][1000 genomes]
rs954411	1.00[CHB][hapmap];1.00[JPT][hapmap];0.98[ASN][1000 genomes]

mRNA abundance (count:2)

SNP	Gene	Cis/trans	Tissue	Source
rs7140574	ERH	cis	parietal	SCAN
rs7140574	RDH11	cis	parietal	SCAN

Chromatin state (count:13 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:69730800-69754000	Weak transcription	Brain Anterior Caudate	brain
2	chr14:69735800-69771600	Weak transcription	Fetal Intestine Small	intestine
3	chr14:69738200-69758200	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
4	chr14:69740400-69754400	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
5	chr14:69745000-69753800	Weak transcription	Fetal Muscle Trunk	muscle
6	chr14:69747200-69753800	Weak transcription	Fetal Muscle Leg	muscle
7	chr14:69748200-69753800	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
8	chr14:69749000-69753800	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
9	chr14:69749000-69758000	Weak transcription	Fetal Heart	heart
10	chr14:69749200-69754200	Weak transcription	Left Ventricle	heart
11	chr14:69750000-69751800	Enhancers	Right Ventricle	heart
12	chr14:69750200-69760600	Weak transcription	Pancreas	Pancrea
13	chr14:69751200-69753800	Weak transcription	Right Atrium	heart

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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