Variant report
Variant | rs11158861 |
---|---|
Chromosome Location | chr14:70907497-70907498 |
allele | C/T |
Outlinks | Ensembl   UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:1)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No data |
No data |
(count:1 , 50 per page) page:
1
No. | Distal block | Cell Line | Cell type | Cell Stage |
---|---|---|---|---|
1 | chr14:70884634..70887118-chr14:70904872..70907534,2 | MCF-7 | breast: |
No data |
No data |
No data |
No data |
rs_ID | r2[population] |
---|---|
rs10133282 | 0.85[ASN][1000 genomes] |
rs10139500 | 0.90[ASN][1000 genomes] |
rs10144818 | 0.87[ASN][1000 genomes] |
rs10150707 | 0.87[ASN][1000 genomes] |
rs11844845 | 0.86[ASN][1000 genomes] |
rs12588623 | 0.83[ASN][1000 genomes] |
rs12589762 | 0.85[AFR][1000 genomes];0.87[AMR][1000 genomes];0.95[EUR][1000 genomes];0.97[ASN][1000 genomes] |
rs12889741 | 0.85[AMR][1000 genomes];0.95[EUR][1000 genomes];0.97[ASN][1000 genomes] |
rs12894199 | 0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes] |
rs1892282 | 0.81[AFR][1000 genomes] |
rs2332384 | 0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes] |
rs2877657 | 0.83[ASN][1000 genomes] |
rs4541006 | 0.96[AFR][1000 genomes];0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs4902815 | 0.92[ASN][1000 genomes] |
rs55728800 | 0.83[ASN][1000 genomes] |
rs58186506 | 0.89[ASN][1000 genomes] |
rs59788049 | 0.80[AMR][1000 genomes];1.00[ASN][1000 genomes] |
rs61979082 | 0.99[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs66886776 | 0.96[ASN][1000 genomes] |
rs7141636 | 0.87[ASN][1000 genomes] |
rs7144478 | 0.85[AMR][1000 genomes];0.94[EUR][1000 genomes];0.93[ASN][1000 genomes] |
rs8014179 | 0.89[ASN][1000 genomes] |

No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | nsv902075 | chr14:70612618-70919016 | Enhancers Strong transcription Weak transcription Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent/Poised TSS Active TSS ZNF genes & repeats Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3' | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site | 15 gene(s) | inside rSNPs | diseases |
2 | esv3431215 | chr14:70903367-70909828 | ZNF genes & repeats Weak transcription | Chromatin interactive region | n/a | inside rSNPs | n/a |
No data |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr14:70907200-70908800 | Weak transcription | Left Ventricle | heart |