Variant report

Variant	rs11163843
Chromosome Location	chr1:84252434-84252435
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 8 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:8)

rs_ID	r²[population]
rs12070852	1.00[GIH][hapmap];1.00[MEX][hapmap];1.00[EUR][1000 genomes]
rs12074456	0.83[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12079095	0.83[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12094749	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs57112933	1.00[EUR][1000 genomes]
rs61243881	1.00[EUR][1000 genomes]
rs6661582	0.83[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7534874	1.00[EUR][1000 genomes]

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:84245200-84253400	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
2	chr1:84248200-84252600	Weak transcription	Liver	Liver
3	chr1:84251400-84252600	ZNF genes & repeats	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
4	chr1:84252200-84254200	Enhancers	iPS-18 Cell Line	embryonic stem cell
5	chr1:84252200-84254600	Enhancers	iPS-15b Cell Line	embryonic stem cell
6	chr1:84252200-84254800	Enhancers	HUES48 Cell Line	embryonic stem cell
7	chr1:84252200-84255000	Enhancers	ES-I3 Cell Line	embryonic stem cell
8	chr1:84252400-84254600	Enhancers	HUES64 Cell Line	embryonic stem cell

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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