Variant report

Variant	rs11167991
Chromosome Location	chr5:146869536-146869537
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr5:146864988..146868068-chr5:146868350..146871206,3	K562	blood:

Extended variants
information (count: 19 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:19)

rs_ID	r²[population]
rs11959608	0.96[EUR][1000 genomes]
rs12186397	0.98[EUR][1000 genomes]
rs12653303	0.90[AMR][1000 genomes];0.99[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs1432845	0.96[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs4705040	0.90[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs56348704	0.99[EUR][1000 genomes]
rs57813393	0.99[EUR][1000 genomes]
rs59183728	0.96[EUR][1000 genomes]
rs67890710	0.98[EUR][1000 genomes]
rs6860091	0.97[EUR][1000 genomes]
rs726054	1.00[AFR][1000 genomes];0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72833356	0.99[EUR][1000 genomes]
rs72833358	0.97[EUR][1000 genomes]
rs72833362	0.98[EUR][1000 genomes]
rs72833367	0.98[EUR][1000 genomes]
rs72833377	0.97[EUR][1000 genomes]
rs73264243	1.00[EUR][1000 genomes]
rs73794776	0.87[AMR][1000 genomes];0.99[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs7726760	0.97[EUR][1000 genomes]

No data

Chromatin state (count:30 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:146851800-146883000	Weak transcription	Psoas Muscle	Psoas
2	chr5:146864600-146869600	Weak transcription	Duodenum Smooth Muscle	Duodenum
3	chr5:146864600-146870200	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
4	chr5:146864600-146883000	Weak transcription	Stomach Smooth Muscle	stomach
5	chr5:146864800-146870400	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
6	chr5:146865200-146882600	Weak transcription	Fetal Stomach	stomach
7	chr5:146865400-146870600	Weak transcription	Osteobl	bone
8	chr5:146865600-146870000	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
9	chr5:146866600-146870200	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
10	chr5:146866600-146870200	Weak transcription	Adipose Nuclei	Adipose
11	chr5:146866800-146870000	Weak transcription	Colon Smooth Muscle	Colon
12	chr5:146866800-146882600	Weak transcription	NHLF	lung
13	chr5:146866800-146883000	Weak transcription	Ovary	ovary
14	chr5:146867000-146870200	Weak transcription	H1 Cell Line	embryonic stem cell
15	chr5:146867000-146870200	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
16	chr5:146867000-146870600	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
17	chr5:146867200-146869600	Strong transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
18	chr5:146867600-146869800	Weak transcription	iPS-18 Cell Line	embryonic stem cell
19	chr5:146867600-146870000	Weak transcription	HUES48 Cell Line	embryonic stem cell
20	chr5:146867800-146870200	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
21	chr5:146867800-146870400	Weak transcription	Rectal Smooth Muscle	rectum
22	chr5:146868000-146869800	Weak transcription	HUES64 Cell Line	embryonic stem cell
23	chr5:146868000-146869800	Weak transcription	iPS-20b Cell Line	embryonic stem cell
24	chr5:146868000-146870000	Weak transcription	ES-I3 Cell Line	embryonic stem cell
25	chr5:146868000-146870000	Weak transcription	iPS-15b Cell Line	embryonic stem cell
26	chr5:146868000-146870200	Weak transcription	H9 Cell Line	embryonic stem cell
27	chr5:146868000-146870200	Weak transcription	HUES6 Cell Line	embryonic stem cell
28	chr5:146868200-146870200	Weak transcription	HUVEC	blood vessel
29	chr5:146868400-146870600	Weak transcription	Spleen	Spleen
30	chr5:146868800-146870400	Weak transcription	Fetal Muscle Leg	muscle

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