Variant report
| Variant | rs12186397 |
|---|---|
| Chromosome Location | chr5:146885625-146885626 |
| allele | A/C |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr5:146871400-146886400 | Weak transcription | H1 Cell Line | embryonic stem cell |
| 2 | chr5:146871600-146887200 | Weak transcription | HUES6 Cell Line | embryonic stem cell |
| 3 | chr5:146873200-146887400 | Weak transcription | ES-UCSF4 Cell Line | embryonic stem cell |
| 4 | chr5:146878800-146887200 | Weak transcription | hESC Derived CD56+ Ectoderm Cultured Cells | ES cell derived |
| 5 | chr5:146879800-146887000 | Weak transcription | H9 Derived Neuron Cultured Cells | ES cell derived |
| 6 | chr5:146882000-146886600 | Weak transcription | iPS-20b Cell Line | embryonic stem cell |
| 7 | chr5:146882800-146887000 | Weak transcription | iPS-18 Cell Line | embryonic stem cell |
| 8 | chr5:146882800-146887200 | Weak transcription | iPS-15b Cell Line | embryonic stem cell |
| 9 | chr5:146883000-146886400 | Enhancers | Colon Smooth Muscle | Colon |
| 10 | chr5:146883200-146887000 | Weak transcription | Fetal Muscle Trunk | muscle |
| 11 | chr5:146883400-146886400 | Weak transcription | HUES48 Cell Line | embryonic stem cell |
| 12 | chr5:146883600-146886400 | Weak transcription | HUES64 Cell Line | embryonic stem cell |
| 13 | chr5:146883800-146887200 | Weak transcription | Skeletal Muscle Female | skeletal muscle |
| 14 | chr5:146884000-146886600 | Weak transcription | Ovary | ovary |
| 15 | chr5:146884000-146887000 | Weak transcription | ES-I3 Cell Line | embryonic stem cell |
| 16 | chr5:146884000-146887200 | Weak transcription | Fetal Stomach | stomach |
| 17 | chr5:146884200-146886200 | Enhancers | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
| 18 | chr5:146884200-146886200 | Weak transcription | Rectal Smooth Muscle | rectum |
| 19 | chr5:146884200-146886400 | Weak transcription | Adipose Nuclei | Adipose |
| 20 | chr5:146884200-146887000 | Weak transcription | Ganglion Eminence derived primary cultured neurospheres | brain |
| 21 | chr5:146884200-146887000 | Weak transcription | Fetal Muscle Leg | muscle |
| 22 | chr5:146884200-146887000 | Enhancers | HUVEC | blood vessel |
| 23 | chr5:146884200-146887400 | Weak transcription | Aorta | Aorta |
| 24 | chr5:146884400-146886400 | Weak transcription | Brain Germinal Matrix | brain |
| 25 | chr5:146884400-146887000 | Weak transcription | NHLF | lung |
| 26 | chr5:146884400-146887200 | Weak transcription | IMR90 fetal lung fibroblasts Cell Line | lung |
| 27 | chr5:146884400-146887200 | Weak transcription | Right Atrium | heart |
| 28 | chr5:146884400-146887200 | Weak transcription | NHDF-Ad | bronchial |
| 29 | chr5:146884400-146887400 | Weak transcription | Foreskin Fibroblast Primary Cells skin02 | Skin |
| 30 | chr5:146884400-146887600 | Weak transcription | Muscle Satellite Cultured Cells | -- |
| 31 | chr5:146884400-146887600 | Weak transcription | Foreskin Fibroblast Primary Cells skin01 | Skin |
| 32 | chr5:146884600-146886600 | Weak transcription | Duodenum Smooth Muscle | Duodenum |
| 33 | chr5:146884800-146886600 | Weak transcription | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
| 34 | chr5:146884800-146886800 | Weak transcription | Osteobl | bone |
| 35 | chr5:146885000-146886600 | Weak transcription | Stomach Smooth Muscle | stomach |
| 36 | chr5:146885200-146886000 | Genic enhancers | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 37 | chr5:146885400-146886200 | Weak transcription | Bone Marrow Derived Cultured Mesenchymal Stem Cells | Bone marrow |
| 38 | chr5:146885600-146886400 | Weak transcription | NH-A | brain |
