Variant report

Variant	rs11168427
Chromosome Location	chr12:48538979-48538980
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr12:48536767..48541851-chr12:48541890..48543935,4	MCF-7	breast:
2	chr12:48530127..48532875-chr12:48538480..48541109,2	K562	blood:
3	chr12:48512550..48515165-chr12:48537351..48539003,2	MCF-7	breast:
4	chr12:48534151..48536064-chr12:48536887..48539029,3	K562	blood:
5	chr12:48537781..48542389-chr12:48543120..48545726,5	K562	blood:
6	chr12:48527054..48529468-chr12:48538732..48540822,3	K562	blood:

Variant related genes	Relation type
ENSG00000152556	Chromatin interaction
ENSG00000177981	Chromatin interaction

Extended variants
information (count: 120 )
Associated
traits (count: 14 )

rSNPs within LD-proxies of this variant (count:115)

rs_ID	r²[population]
rs10082861	0.88[CHB][hapmap];1.00[JPT][hapmap];0.93[ASN][1000 genomes]
rs10219623	1.00[CHB][hapmap];1.00[JPT][hapmap];0.83[AMR][1000 genomes];0.99[ASN][1000 genomes]
rs10219645	0.90[ASN][1000 genomes]
rs10467101	0.88[CHB][hapmap];0.84[JPT][hapmap]
rs10875724	0.93[JPT][hapmap]
rs10875725	0.93[GIH][hapmap];1.00[JPT][hapmap]
rs10875732	0.92[CEU][hapmap];1.00[JPT][hapmap];0.85[YRI][hapmap]
rs10875735	0.92[CEU][hapmap];0.90[AFR][1000 genomes];0.91[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs10875736	0.90[AFR][1000 genomes];0.88[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs10875737	0.90[AFR][1000 genomes];0.91[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs10875738	0.91[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs10875740	0.90[AFR][1000 genomes];0.91[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs10875745	1.00[CHB][hapmap];1.00[CHD][hapmap];0.88[GIH][hapmap];1.00[JPT][hapmap];0.86[LWK][hapmap];0.89[MKK][hapmap];0.83[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs10875746	0.94[CHB][hapmap];0.94[CHD][hapmap];0.92[GIH][hapmap];1.00[JPT][hapmap];0.91[MEX][hapmap];0.85[TSI][hapmap];0.91[AMR][1000 genomes];0.89[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs10875747	0.82[AFR][1000 genomes];0.98[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10875748	0.82[AFR][1000 genomes];0.98[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10875750	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];0.97[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.86[LWK][hapmap];0.91[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs10875756	0.80[AMR][1000 genomes];0.91[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs10875762	0.81[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs10875767	0.88[CHB][hapmap];0.93[JPT][hapmap]
rs10875770	0.89[CHB][hapmap];0.88[CHD][hapmap];0.93[JPT][hapmap]
rs10875772	0.89[CHB][hapmap];0.88[CHD][hapmap];0.93[JPT][hapmap];0.82[MEX][hapmap]
rs10875792	0.86[CHB][hapmap];0.85[JPT][hapmap]
rs10875793	0.82[CHB][hapmap];0.92[JPT][hapmap]
rs11168355	1.00[GIH][hapmap];0.85[LWK][hapmap];0.85[TSI][hapmap];0.82[YRI][hapmap]
rs11168357	0.96[GIH][hapmap];0.93[JPT][hapmap];0.85[LWK][hapmap];0.85[TSI][hapmap];0.82[YRI][hapmap]
rs11168369	0.86[CEU][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap]
rs11168371	0.93[CEU][hapmap];0.88[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.86[LWK][hapmap];0.91[MEX][hapmap];0.88[MKK][hapmap];0.90[TSI][hapmap]
rs11168383	0.90[AFR][1000 genomes];0.91[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs11168386	0.90[AFR][1000 genomes];0.89[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs11168401	0.90[AFR][1000 genomes];0.91[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs11168403	0.85[CEU][hapmap];1.00[JPT][hapmap];0.90[AFR][1000 genomes];0.91[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs11168413	1.00[CHB][hapmap];1.00[JPT][hapmap];0.83[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs11168414	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs11168415	0.94[ASN][1000 genomes]
rs11168416	0.94[ASN][1000 genomes]
rs11168418	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.93[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];0.98[AMR][1000 genomes];0.95[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs11168420	1.00[CEU][hapmap];0.94[CHB][hapmap];0.97[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];0.96[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs11168421	0.94[CHB][hapmap];0.91[CHD][hapmap];0.84[GIH][hapmap];1.00[JPT][hapmap];0.93[ASN][1000 genomes]
rs11168422	0.98[AMR][1000 genomes];0.94[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs11168425	0.94[CHB][hapmap];1.00[CHD][hapmap];0.93[GIH][hapmap];1.00[JPT][hapmap];0.96[ASN][1000 genomes]
rs11168433	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.92[LWK][hapmap];1.00[MEX][hapmap];0.85[MKK][hapmap];0.97[TSI][hapmap];1.00[YRI][hapmap];0.82[AMR][1000 genomes];0.91[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs11168450	0.94[CHB][hapmap];0.91[CHD][hapmap];1.00[JPT][hapmap]
rs11168459	0.89[CHB][hapmap];0.88[CHD][hapmap];0.93[JPT][hapmap]
rs11168516	0.83[CHB][hapmap];0.87[JPT][hapmap]
rs11558768	0.83[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs12228854	0.82[YRI][hapmap]
rs12297004	0.90[AFR][1000 genomes];0.91[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs12297470	1.00[CHB][hapmap];1.00[CHD][hapmap];0.93[GIH][hapmap];1.00[JPT][hapmap];0.84[MEX][hapmap];0.83[AMR][1000 genomes];0.99[ASN][1000 genomes]
rs12301339	0.89[CEU][hapmap];1.00[YRI][hapmap];0.90[AFR][1000 genomes];0.91[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs12304476	0.84[ASW][hapmap];0.93[CEU][hapmap];0.82[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.86[LWK][hapmap];0.91[MEX][hapmap];0.86[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.90[AFR][1000 genomes];0.91[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs12305182	0.93[JPT][hapmap]
rs12305511	0.93[CEU][hapmap];1.00[CHB][hapmap];0.94[CHD][hapmap];0.88[GIH][hapmap];1.00[JPT][hapmap];0.85[LWK][hapmap];0.91[MEX][hapmap];0.85[MKK][hapmap];0.94[TSI][hapmap];0.84[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs12305647	0.84[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs12306290	0.91[ASN][1000 genomes]
rs12306451	0.84[ASW][hapmap];0.93[CEU][hapmap];0.85[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.86[LWK][hapmap];0.91[MEX][hapmap];0.89[MKK][hapmap];0.97[TSI][hapmap];1.00[YRI][hapmap];0.90[AFR][1000 genomes];0.91[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs12310813	1.00[CHB][hapmap];1.00[CHD][hapmap];0.93[GIH][hapmap];1.00[JPT][hapmap];0.84[MEX][hapmap];0.83[AMR][1000 genomes];0.99[ASN][1000 genomes]
rs12311774	0.90[AFR][1000 genomes];0.91[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs12311953	0.90[AFR][1000 genomes];0.91[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs12312134	1.00[CHB][hapmap];0.93[JPT][hapmap];0.91[ASN][1000 genomes]
rs12313300	0.90[AFR][1000 genomes];0.91[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs12313404	0.90[AFR][1000 genomes];0.89[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs12315625	0.90[AFR][1000 genomes];0.91[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs1471997	0.86[JPT][hapmap]
rs17122620	0.90[AFR][1000 genomes];0.91[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs17122666	1.00[ASW][hapmap];1.00[CEU][hapmap];0.94[CHB][hapmap];0.94[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];0.97[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.95[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs17122812	0.89[CHB][hapmap];0.93[JPT][hapmap]
rs1859445	1.00[CHB][hapmap];0.97[CHD][hapmap];0.96[GIH][hapmap];1.00[JPT][hapmap];0.84[MEX][hapmap];0.83[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs2012773	0.94[CHB][hapmap];1.00[JPT][hapmap]
rs2079295	0.93[JPT][hapmap]
rs2107638	0.94[CHB][hapmap];1.00[JPT][hapmap];0.83[AMR][1000 genomes];0.95[ASN][1000 genomes]
rs2158516	0.90[AFR][1000 genomes];0.91[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs2228500	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2269933	0.94[CHB][hapmap];0.94[CHD][hapmap];0.89[GIH][hapmap];1.00[JPT][hapmap];0.94[ASN][1000 genomes]
rs2269935	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];0.94[CHD][hapmap];0.84[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.96[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2269936	0.85[CEU][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap]
rs2279464	0.82[CHB][hapmap];0.87[JPT][hapmap]
rs2286021	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs3185921	0.87[JPT][hapmap]
rs3782910	0.93[CEU][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.90[AFR][1000 genomes];0.91[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs3782911	0.90[AFR][1000 genomes];0.91[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs3809322	0.82[YRI][hapmap]
rs4760609	1.00[GIH][hapmap];0.93[JPT][hapmap];0.84[MEX][hapmap];0.85[TSI][hapmap]
rs4760619	0.88[CHB][hapmap];1.00[JPT][hapmap];0.90[ASN][1000 genomes]
rs4760622	0.93[CEU][hapmap];1.00[CHB][hapmap];0.94[CHD][hapmap];0.88[GIH][hapmap];1.00[JPT][hapmap];0.91[MEX][hapmap];0.83[MKK][hapmap];0.94[TSI][hapmap];0.84[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs4760680	0.90[AFR][1000 genomes];0.91[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs4760681	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.96[GIH][hapmap];1.00[JPT][hapmap];0.93[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];0.98[AMR][1000 genomes];0.96[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs4760684	0.94[ASN][1000 genomes]
rs4760687	0.94[CHB][hapmap];1.00[CHD][hapmap];0.93[GIH][hapmap];1.00[JPT][hapmap];0.88[ASN][1000 genomes]
rs4760689	0.82[AMR][1000 genomes];0.91[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs4760690	0.80[AMR][1000 genomes];0.91[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs4760695	0.84[ASW][hapmap];0.93[CEU][hapmap];1.00[CHB][hapmap];0.94[CHD][hapmap];0.88[GIH][hapmap];1.00[JPT][hapmap];0.85[LWK][hapmap];0.91[MEX][hapmap];0.81[MKK][hapmap];0.94[TSI][hapmap];1.00[YRI][hapmap];0.82[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs4760696	0.94[CHB][hapmap];0.91[CHD][hapmap];1.00[JPT][hapmap]
rs4760697	0.94[CHB][hapmap];0.91[CHD][hapmap];1.00[JPT][hapmap]
rs58952582	0.90[AFR][1000 genomes];0.91[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs60106007	0.94[ASN][1000 genomes]
rs60761335	0.90[AFR][1000 genomes];0.91[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs61343568	0.88[ASN][1000 genomes]
rs61918806	0.90[AFR][1000 genomes];0.91[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs61918809	0.90[AFR][1000 genomes];0.96[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs61918810	0.90[AFR][1000 genomes];0.91[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs6580659	0.92[CHB][hapmap];1.00[JPT][hapmap]
rs7135779	0.94[CHB][hapmap];1.00[JPT][hapmap]
rs719008	0.93[JPT][hapmap]
rs725454	1.00[CEU][hapmap];0.94[CHB][hapmap];0.94[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.93[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];0.98[AMR][1000 genomes];0.96[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs7299135	0.93[JPT][hapmap]
rs7299271	0.93[JPT][hapmap]
rs73102065	0.90[AFR][1000 genomes];0.91[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs73102067	0.90[AFR][1000 genomes];0.87[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs7485355	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs7486424	0.94[CHB][hapmap];1.00[JPT][hapmap];0.88[ASN][1000 genomes]
rs8804	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];0.82[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs886588	0.84[ASW][hapmap];0.93[CEU][hapmap];0.85[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.86[LWK][hapmap];0.91[MEX][hapmap];0.88[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.90[AFR][1000 genomes];0.91[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs9634261	0.83[CHB][hapmap];0.87[JPT][hapmap]
rs989144	0.93[CEU][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.90[AFR][1000 genomes];0.91[AMR][1000 genomes];0.90[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:5 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2758307	chr12:48429702-48825499	Weak transcription Enhancers Active TSS Strong transcription Flanking Active TSS Flanking Bivalent TSS/Enh Genic enhancers Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	57 gene(s)	inside rSNPs	diseases
2	esv2759898	chr12:48429702-48825499	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers Enhancers Active TSS Flanking Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	57 gene(s)	inside rSNPs	diseases
3	nsv508673	chr12:48489786-48567138	Flanking Active TSS Weak transcription Enhancers Active TSS Strong transcription Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	23 gene(s)	inside rSNPs	diseases
4	nsv558790	chr12:48529168-48539888	Weak transcription Strong transcription ZNF genes & repeats Enhancers Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region miRNA target site	2 gene(s)	inside rSNPs	n/a
5	nsv8971	chr12:48536526-48758501	Flanking Active TSS Enhancers Weak transcription Bivalent Enhancer Strong transcription Bivalent/Poised TSS Genic enhancers Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	39 gene(s)	inside rSNPs	diseases

mRNA abundance (count:14)

SNP	Gene	Cis/trans	Tissue	Source
rs11168427	H1FNT	cis	cerebellum	SCAN
rs11168427	RP1-228P16.1	cis	Adipose Subcutaneous	GTEx
rs11168427	RP1-228P16.1	cis	Artery Tibial	GTEx
rs11168427	SENP1	cis	cerebellum	SCAN
rs11168427	LMBR1L	cis	cerebellum	SCAN
rs11168427	ASB8	cis	parietal	SCAN
rs11168427	RP1-228P16.1	cis	Skin Sun Exposed Lower leg	GTEx
rs11168427	RP1-228P16.1	cis	Heart Left Ventricle	GTEx
rs11168427	FAM186B	cis	parietal	SCAN
rs11168427	LOC255411	cis	cerebellum	SCAN
rs11168427	PRKAG1	cis	parietal	SCAN
rs11168427	SENP1	cis	parietal	SCAN
rs11168427	ASB8	cis	cerebellum	SCAN
rs11168427	RP1-228P16.1	cis	Thyroid	GTEx

Chromatin state (count:125 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:48515800-48545600	Strong transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
2	chr12:48516200-48545400	Strong transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
3	chr12:48516200-48547200	Strong transcription	Foreskin Fibroblast Primary Cells skin01	Skin
4	chr12:48516400-48542000	Strong transcription	Breast Myoepithelial Primary Cells	Breast
5	chr12:48516400-48545000	Strong transcription	GM12878-XiMat	blood
6	chr12:48516400-48545400	Strong transcription	Fetal Adrenal Gland	Adrenal Gland
7	chr12:48516400-48545800	Strong transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
8	chr12:48516400-48547200	Strong transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
9	chr12:48516400-48547200	Strong transcription	Stomach Smooth Muscle	stomach
10	chr12:48516400-48547800	Strong transcription	Fetal Stomach	stomach
11	chr12:48516600-48543200	Weak transcription	Stomach Mucosa	stomach
12	chr12:48516600-48545400	Strong transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
13	chr12:48516600-48545600	Strong transcription	Ganglion Eminence derived primary cultured neurospheres	brain
14	chr12:48516800-48547400	Strong transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
15	chr12:48517600-48547400	Strong transcription	H9 Derived Neuron Cultured Cells	ES cell derived
16	chr12:48518600-48547600	Strong transcription	Cortex derived primary cultured neurospheres	brain
17	chr12:48519600-48547200	Strong transcription	Primary B cells from peripheral blood	blood
18	chr12:48520000-48545600	Strong transcription	Hela-S3	cervix
19	chr12:48520800-48547400	Strong transcription	Fetal Brain Female	brain
20	chr12:48523400-48546600	Strong transcription	Fetal Muscle Leg	muscle
21	chr12:48523800-48540400	Strong transcription	Foreskin Melanocyte Primary Cells skin03	Skin
22	chr12:48523800-48547400	Strong transcription	Sigmoid Colon	Sigmoid Colon
23	chr12:48525000-48539800	Strong transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
24	chr12:48525600-48546200	Strong transcription	A549	lung
25	chr12:48526200-48547600	Strong transcription	Adipose Nuclei	Adipose
26	chr12:48526400-48540200	Weak transcription	Primary T killer memory cells from peripheral blood	blood
27	chr12:48526400-48543600	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
28	chr12:48529200-48542000	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
29	chr12:48529600-48539600	Weak transcription	K562	blood
30	chr12:48530200-48547600	Strong transcription	Placenta	Placenta
31	chr12:48530400-48539800	Strong transcription	Fetal Intestine Small	intestine
32	chr12:48531000-48540400	Strong transcription	IMR90 fetal lung fibroblasts Cell Line	lung
33	chr12:48531000-48540800	Strong transcription	Brain Dorsolateral Prefrontal Cortex	brain
34	chr12:48531000-48541400	Strong transcription	Brain Anterior Caudate	brain
35	chr12:48531000-48541800	Strong transcription	Fetal Lung	lung
36	chr12:48531000-48546400	Strong transcription	Brain Angular Gyrus	brain
37	chr12:48531000-48547400	Strong transcription	Primary mononuclear cells fromperipheralblood	Blood
38	chr12:48531000-48547800	Strong transcription	Fetal Muscle Trunk	muscle
39	chr12:48531200-48540200	Strong transcription	Ovary	ovary
40	chr12:48531200-48540200	Strong transcription	NHLF	lung
41	chr12:48531200-48540400	Strong transcription	Foreskin Fibroblast Primary Cells skin02	Skin
42	chr12:48531200-48540400	Strong transcription	Colon Smooth Muscle	Colon
43	chr12:48531200-48540400	Strong transcription	NHEK	skin
44	chr12:48531200-48540600	Strong transcription	Muscle Satellite Cultured Cells	--
45	chr12:48531200-48540800	Strong transcription	Rectal Mucosa Donor 31	rectum
46	chr12:48531200-48541200	Strong transcription	NH-A	brain
47	chr12:48531200-48541400	Strong transcription	Brain Germinal Matrix	brain
48	chr12:48531200-48542200	Strong transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
49	chr12:48531200-48547400	Strong transcription	Primary hematopoietic stem cells short term culture	blood
50	chr12:48531200-48547400	Strong transcription	Duodenum Mucosa	Duodenum

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