Variant report

Variant rs8804
Chromosome Location chr12:48541757-48541758
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:126 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:48515800-48545600 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
2 chr12:48516200-48545400 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
3 chr12:48516200-48547200 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
4 chr12:48516400-48542000 Strong transcription Breast Myoepithelial Primary Cells Breast
5 chr12:48516400-48545000 Strong transcription GM12878-XiMat blood
6 chr12:48516400-48545400 Strong transcription Fetal Adrenal Gland Adrenal Gland
7 chr12:48516400-48545800 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
8 chr12:48516400-48547200 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
9 chr12:48516400-48547200 Strong transcription Stomach Smooth Muscle stomach
10 chr12:48516400-48547800 Strong transcription Fetal Stomach stomach
11 chr12:48516600-48543200 Weak transcription Stomach Mucosa stomach
12 chr12:48516600-48545400 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
13 chr12:48516600-48545600 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
14 chr12:48516800-48547400 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
15 chr12:48517600-48547400 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
16 chr12:48518600-48547600 Strong transcription Cortex derived primary cultured neurospheres brain
17 chr12:48519600-48547200 Strong transcription Primary B cells from peripheral blood blood
18 chr12:48520000-48545600 Strong transcription Hela-S3 cervix
19 chr12:48520800-48547400 Strong transcription Fetal Brain Female brain
20 chr12:48523400-48546600 Strong transcription Fetal Muscle Leg muscle
21 chr12:48523800-48547400 Strong transcription Sigmoid Colon Sigmoid Colon
22 chr12:48525600-48546200 Strong transcription A549 lung
23 chr12:48526200-48547600 Strong transcription Adipose Nuclei Adipose
24 chr12:48526400-48543600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
25 chr12:48529200-48542000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
26 chr12:48530200-48547600 Strong transcription Placenta Placenta
27 chr12:48531000-48541800 Strong transcription Fetal Lung lung
28 chr12:48531000-48546400 Strong transcription Brain Angular Gyrus brain
29 chr12:48531000-48547400 Strong transcription Primary mononuclear cells fromperipheralblood Blood
30 chr12:48531000-48547800 Strong transcription Fetal Muscle Trunk muscle
31 chr12:48531200-48542200 Strong transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
32 chr12:48531200-48547400 Strong transcription Primary hematopoietic stem cells short term culture blood
33 chr12:48531200-48547400 Strong transcription Duodenum Mucosa Duodenum
34 chr12:48531200-48547400 Strong transcription Duodenum Smooth Muscle Duodenum
35 chr12:48531200-48547400 Strong transcription Fetal Intestine Large intestine
36 chr12:48531200-48547600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
37 chr12:48531200-48547600 Strong transcription HMEC breast
38 chr12:48531200-48547800 Strong transcription Primary T cells from cord blood blood
39 chr12:48531200-48547800 Strong transcription Brain Inferior Temporal Lobe brain
40 chr12:48531200-48547800 Strong transcription Rectal Mucosa Donor 29 rectum
41 chr12:48531200-48548000 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
42 chr12:48531400-48547400 Strong transcription Colonic Mucosa Colon
43 chr12:48531400-48548000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
44 chr12:48531600-48547200 Strong transcription Brain Hippocampus Middle brain
45 chr12:48531600-48547400 Strong transcription Lung lung
46 chr12:48531600-48547800 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
47 chr12:48532200-48545600 Strong transcription Aorta Aorta
48 chr12:48532200-48548400 Strong transcription Primary T helper naive cells fromperipheralblood blood
49 chr12:48533000-48547400 Strong transcription Primary T helper cells PMA-I stimulated --
50 chr12:48533000-48547800 Strong transcription Liver Liver

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