Variant report
| Variant | rs11171772 |
|---|---|
| Chromosome Location | chr12:56581568-56581569 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr12:56554000-56582000 | Weak transcription | ES-WA7 Cell Line | embryonic stem cell |
| 2 | chr12:56575800-56582000 | Weak transcription | iPS DF 19.11 Cell Line | embryonic stem cell |
| 3 | chr12:56576600-56581600 | Weak transcription | Pancreas | Pancrea |
| 4 | chr12:56579200-56582200 | Weak transcription | Aorta | Aorta |
| 5 | chr12:56579800-56582000 | Weak transcription | Lung | lung |
| 6 | chr12:56580000-56581600 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 7 | chr12:56580000-56581600 | Weak transcription | Placenta | Placenta |
| 8 | chr12:56580000-56581600 | Weak transcription | Gastric | stomach |
| 9 | chr12:56580200-56581600 | Weak transcription | Placenta Amnion | Placenta Amnion |
| 10 | chr12:56580200-56581600 | Weak transcription | Psoas Muscle | Psoas |
| 11 | chr12:56580200-56582200 | Weak transcription | Ovary | ovary |
| 12 | chr12:56580400-56582000 | Weak transcription | Esophagus | oesophagus |
| 13 | chr12:56580600-56581600 | Weak transcription | ES-I3 Cell Line | embryonic stem cell |
| 14 | chr12:56580600-56581600 | Enhancers | Primary T helper memory cells from peripheral blood 2 | blood |
| 15 | chr12:56580600-56581600 | Enhancers | Primary T killer naive cells fromperipheralblood | blood |
| 16 | chr12:56580600-56581600 | Enhancers | Rectal Smooth Muscle | rectum |
| 17 | chr12:56580600-56581600 | Genic enhancers | NHEK | skin |
| 18 | chr12:56580600-56581800 | Enhancers | Primary T helper memory cells from peripheral blood 1 | blood |
| 19 | chr12:56580600-56582000 | Enhancers | Primary monocytes fromperipheralblood | blood |
| 20 | chr12:56580800-56581600 | Weak transcription | H9 Cell Line | embryonic stem cell |
| 21 | chr12:56580800-56581600 | Weak transcription | iPS DF 6.9 Cell Line | embryonic stem cell |
| 22 | chr12:56580800-56581600 | Transcr. at gene 5' and 3' | Ganglion Eminence derived primary cultured neurospheres | brain |
| 23 | chr12:56580800-56581600 | Genic enhancers | Fetal Thymus | thymus |
| 24 | chr12:56580800-56581600 | Weak transcription | Left Ventricle | heart |
| 25 | chr12:56580800-56581800 | Enhancers | Primary neutrophils fromperipheralblood | blood |
| 26 | chr12:56580800-56581800 | Weak transcription | Brain Substantia Nigra | brain |
| 27 | chr12:56580800-56581800 | Genic enhancers | Fetal Intestine Small | intestine |
| 28 | chr12:56580800-56581800 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
| 29 | chr12:56580800-56582000 | Enhancers | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 30 | chr12:56580800-56582200 | Transcr. at gene 5' and 3' | Foreskin Fibroblast Primary Cells skin02 | Skin |
| 31 | chr12:56580800-56582800 | Transcr. at gene 5' and 3' | Dnd41 | blood |
| 32 | chr12:56581000-56581600 | Weak transcription | H1 Cell Line | embryonic stem cell |
| 33 | chr12:56581000-56581600 | Genic enhancers | hESC Derived CD56+ Mesoderm Cultured Cells | ES cell derived |
| 34 | chr12:56581000-56581600 | Weak transcription | HUES6 Cell Line | embryonic stem cell |
| 35 | chr12:56581000-56581600 | Enhancers | iPS-15b Cell Line | embryonic stem cell |
| 36 | chr12:56581000-56581600 | Enhancers | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
| 37 | chr12:56581000-56581600 | Enhancers | ES-UCSF4 Cell Line | embryonic stem cell |
| 38 | chr12:56581000-56581600 | Enhancers | Breast Myoepithelial Primary Cells | Breast |
| 39 | chr12:56581000-56581600 | Enhancers | Primary B cells from cord blood | blood |
| 40 | chr12:56581000-56581600 | Enhancers | Primary T cells from cord blood | blood |
| 41 | chr12:56581000-56581600 | Enhancers | Primary hematopoietic stem cells | blood |
| 42 | chr12:56581000-56581600 | Enhancers | Primary T helper cells PMA-I stimulated | -- |
| 43 | chr12:56581000-56581600 | Genic enhancers | Primary T helper 17 cells PMA-I stimulated | -- |
| 44 | chr12:56581000-56581600 | Enhancers | Adipose Nuclei | Adipose |
| 45 | chr12:56581000-56581600 | Enhancers | Brain Dorsolateral Prefrontal Cortex | brain |
| 46 | chr12:56581000-56581600 | Enhancers | Fetal Brain Male | brain |
| 47 | chr12:56581000-56581600 | Genic enhancers | HSMM | muscle |
| 48 | chr12:56581000-56581800 | Enhancers | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 49 | chr12:56581000-56581800 | Enhancers | Primary T helper naive cells fromperipheralblood | blood |
| 50 | chr12:56581000-56581800 | Enhancers | Fetal Intestine Large | intestine |
