Variant report

Variant rs3809130
Chromosome Location chr12:56510308-56510309
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:127 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:56509000-56510400 Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
2 chr12:56509000-56510600 Active TSS iPS-20b Cell Line embryonic stem cell
3 chr12:56509000-56510600 Active TSS Rectal Mucosa Donor 31 rectum
4 chr12:56509000-56510800 Active TSS HUES48 Cell Line embryonic stem cell
5 chr12:56509000-56510800 Active TSS HUES64 Cell Line embryonic stem cell
6 chr12:56509000-56511000 Active TSS H1 Cell Line embryonic stem cell
7 chr12:56509000-56511600 Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
8 chr12:56509000-56512400 Active TSS Brain Angular Gyrus brain
9 chr12:56509000-56512800 Active TSS H9 Cell Line embryonic stem cell
10 chr12:56509000-56513400 Active TSS ES-I3 Cell Line embryonic stem cell
11 chr12:56509200-56510600 Active TSS HUES6 Cell Line embryonic stem cell
12 chr12:56509200-56510800 Active TSS Primary T helper cells PMA-I stimulated --
13 chr12:56509200-56511000 Active TSS Brain Cingulate Gyrus brain
14 chr12:56509200-56511000 Active TSS Fetal Brain Female brain
15 chr12:56509200-56511000 Active TSS Skeletal Muscle Male skeletal muscle
16 chr12:56509200-56511000 Active TSS HSMM muscle
17 chr12:56509200-56511600 Active TSS iPS DF 19.11 Cell Line embryonic stem cell
18 chr12:56509200-56512400 Active TSS Rectal Mucosa Donor 29 rectum
19 chr12:56509200-56512600 Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
20 chr12:56509200-56512600 Active TSS hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
21 chr12:56509200-56512600 Active TSS Foreskin Melanocyte Primary Cells skin01 Skin
22 chr12:56509200-56512600 Active TSS Duodenum Smooth Muscle Duodenum
23 chr12:56509200-56512800 Active TSS iPS-15b Cell Line embryonic stem cell
24 chr12:56509200-56513000 Active TSS iPS DF 6.9 Cell Line embryonic stem cell
25 chr12:56509200-56513000 Active TSS Lung lung
26 chr12:56509400-56510800 Active TSS iPS-18 Cell Line embryonic stem cell
27 chr12:56509400-56510800 Active TSS A549 lung
28 chr12:56509400-56511000 Active TSS Brain Germinal Matrix brain
29 chr12:56509400-56511000 Active TSS NHEK skin
30 chr12:56509400-56511200 Active TSS IMR90 fetal lung fibroblasts Cell Line lung
31 chr12:56509400-56511600 Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
32 chr12:56509400-56511600 Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
33 chr12:56509400-56511600 Active TSS Brain Anterior Caudate brain
34 chr12:56509400-56511600 Active TSS Brain Hippocampus Middle brain
35 chr12:56509400-56511600 Active TSS Brain Dorsolateral Prefrontal Cortex brain
36 chr12:56509400-56511600 Active TSS Brain Substantia Nigra brain
37 chr12:56509400-56511600 Active TSS Duodenum Mucosa Duodenum
38 chr12:56509400-56511600 Active TSS Fetal Intestine Large intestine
39 chr12:56509400-56511600 Active TSS Placenta Placenta
40 chr12:56509400-56511600 Active TSS Rectal Smooth Muscle rectum
41 chr12:56509400-56511600 Active TSS Right Atrium heart
42 chr12:56509400-56511600 Active TSS Skeletal Muscle Female skeletal muscle
43 chr12:56509400-56511600 Active TSS Stomach Mucosa stomach
44 chr12:56509400-56511600 Active TSS Stomach Smooth Muscle stomach
45 chr12:56509400-56512200 Active TSS Fetal Muscle Trunk muscle
46 chr12:56509400-56512200 Active TSS HMEC breast
47 chr12:56509400-56512400 Active TSS Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
48 chr12:56509400-56512400 Active TSS Ganglion Eminence derived primary cultured neurospheres brain
49 chr12:56509400-56512400 Active TSS Brain Inferior Temporal Lobe brain
50 chr12:56509400-56512400 Active TSS Colonic Mucosa Colon

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