Variant report

Variant rs2277340
Chromosome Location chr12:56435612-56435613
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:127 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:56431600-56435800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
2 chr12:56434400-56436800 Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
3 chr12:56434600-56436400 Active TSS HUES64 Cell Line embryonic stem cell
4 chr12:56434600-56436400 Active TSS iPS-20b Cell Line embryonic stem cell
5 chr12:56434600-56436400 Active TSS Brain Inferior Temporal Lobe brain
6 chr12:56434600-56436600 Active TSS ES-I3 Cell Line embryonic stem cell
7 chr12:56434600-56436600 Active TSS iPS-18 Cell Line embryonic stem cell
8 chr12:56434600-56436800 Active TSS H1 Cell Line embryonic stem cell
9 chr12:56434600-56436800 Active TSS H9 Cell Line embryonic stem cell
10 chr12:56434600-56436800 Active TSS NHLF lung
11 chr12:56434600-56437200 Active TSS Pancreatic Islets Pancreatic Islet
12 chr12:56434800-56435800 Active TSS HepG2 liver
13 chr12:56434800-56436400 Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
14 chr12:56434800-56436400 Active TSS Fetal Brain Female brain
15 chr12:56434800-56436600 Active TSS ES-WA7 Cell Line embryonic stem cell
16 chr12:56434800-56436600 Active TSS ES-UCSF4 Cell Line embryonic stem cell
17 chr12:56434800-56436600 Active TSS Fetal Brain Male brain
18 chr12:56434800-56436600 Active TSS Psoas Muscle Psoas
19 chr12:56434800-56436800 Active TSS Foreskin Fibroblast Primary Cells skin02 Skin
20 chr12:56434800-56437000 Active TSS iPS DF 6.9 Cell Line embryonic stem cell
21 chr12:56434800-56437000 Active TSS iPS DF 19.11 Cell Line embryonic stem cell
22 chr12:56435000-56435800 Active TSS Aorta Aorta
23 chr12:56435000-56436200 Active TSS Skeletal Muscle Female skeletal muscle
24 chr12:56435000-56436400 Active TSS hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
25 chr12:56435000-56436400 Active TSS HUES6 Cell Line embryonic stem cell
26 chr12:56435000-56436400 Active TSS Foreskin Melanocyte Primary Cells skin01 Skin
27 chr12:56435000-56436400 Active TSS Brain Angular Gyrus brain
28 chr12:56435000-56436400 Active TSS Brain Cingulate Gyrus brain
29 chr12:56435000-56436400 Active TSS Duodenum Mucosa Duodenum
30 chr12:56435000-56436400 Active TSS A549 lung
31 chr12:56435000-56436400 Active TSS HSMM muscle
32 chr12:56435000-56436600 Active TSS H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
33 chr12:56435000-56436600 Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
34 chr12:56435000-56436600 Active TSS hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
35 chr12:56435000-56436600 Active TSS IMR90 fetal lung fibroblasts Cell Line lung
36 chr12:56435000-56436600 Active TSS Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
37 chr12:56435000-56436600 Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
38 chr12:56435000-56436600 Active TSS GM12878-XiMat blood
39 chr12:56435000-56436800 Active TSS Breast Myoepithelial Primary Cells Breast
40 chr12:56435000-56436800 Active TSS Esophagus oesophagus
41 chr12:56435000-56436800 Active TSS Right Atrium heart
42 chr12:56435000-56436800 Active TSS HSMMtube muscle
43 chr12:56435000-56436800 Active TSS NH-A brain
44 chr12:56435000-56437000 Active TSS iPS-15b Cell Line embryonic stem cell
45 chr12:56435000-56437400 Active TSS Right Ventricle heart
46 chr12:56435200-56436400 Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
47 chr12:56435200-56436400 Active TSS Primary hematopoietic stem cells short term culture blood
48 chr12:56435200-56436400 Active TSS Cortex derived primary cultured neurospheres brain
49 chr12:56435200-56436400 Active TSS Ganglion Eminence derived primary cultured neurospheres brain
50 chr12:56435200-56436400 Active TSS Colonic Mucosa Colon

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