Variant report

Variant	rs11174243
Chromosome Location	chr12:62327025-62327026
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 15 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:14)

rs_ID	r²[population]
rs11174248	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12305044	1.00[EUR][1000 genomes]
rs12306906	1.00[EUR][1000 genomes]
rs12307540	1.00[EUR][1000 genomes]
rs12309121	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12320150	0.85[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs3847912	1.00[EUR][1000 genomes]
rs58600898	1.00[EUR][1000 genomes]
rs73310271	1.00[EUR][1000 genomes]
rs73310273	1.00[EUR][1000 genomes]
rs74096113	0.85[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7962524	1.00[EUR][1000 genomes]
rs7964628	1.00[EUR][1000 genomes]
rs7977306	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1039741	chr12:62046850-62491052	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats Strong transcription Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:62326800-62328000	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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