Variant report

rSNPs within LD-proxies of this variant (count:24)

rs_ID	r²[population]
rs10506434	1.00[JPT][hapmap]
rs11174243	1.00[EUR][1000 genomes]
rs11174248	1.00[EUR][1000 genomes]
rs11832494	1.00[JPT][hapmap]
rs11833386	1.00[JPT][hapmap]
rs12306906	0.86[YRI][hapmap];0.84[AFR][1000 genomes];0.90[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12307540	0.86[AFR][1000 genomes];0.90[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12309121	1.00[EUR][1000 genomes]
rs12312418	1.00[CHB][hapmap]
rs12320150	1.00[EUR][1000 genomes]
rs17657200	1.00[JPT][hapmap]
rs17657299	1.00[JPT][hapmap]
rs17713979	1.00[JPT][hapmap]
rs349883	1.00[CEU][hapmap]
rs3847912	1.00[EUR][1000 genomes]
rs58600898	1.00[EUR][1000 genomes]
rs6581434	0.86[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs7135641	1.00[JPT][hapmap]
rs73310271	1.00[EUR][1000 genomes]
rs73310273	1.00[EUR][1000 genomes]
rs74096113	1.00[EUR][1000 genomes]
rs7962524	1.00[EUR][1000 genomes]
rs7964628	1.00[EUR][1000 genomes]
rs7977306	0.86[AFR][1000 genomes];0.80[AMR][1000 genomes];1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1039741	chr12:62046850-62491052	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats Strong transcription Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:62307600-62308800	Weak transcription	Liver	Liver

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