Variant report

rSNPs within LD-proxies of this variant (count:23)

rs_ID	r²[population]
rs12305044	1.00[CEU][hapmap]
rs1920706	1.00[CHB][hapmap]
rs2582333	1.00[CEU][hapmap];1.00[CHB][hapmap]
rs2582335	1.00[CHB][hapmap]
rs2701154	1.00[CEU][hapmap]
rs349873	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[ASN][1000 genomes]
rs349875	1.00[ASN][1000 genomes]
rs349882	0.86[AFR][1000 genomes]
rs349884	0.84[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs349885	1.00[CHB][hapmap];0.81[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs349887	1.00[CEU][hapmap];1.00[CHB][hapmap]
rs349888	1.00[CEU][hapmap];1.00[CHB][hapmap]
rs699558	1.00[CHB][hapmap]
rs7134824	1.00[CEU][hapmap]
rs851903	1.00[CEU][hapmap];1.00[CHB][hapmap]
rs851905	1.00[CEU][hapmap];1.00[CHB][hapmap];0.95[ASN][1000 genomes]
rs851906	1.00[CHB][hapmap]
rs851908	1.00[CEU][hapmap];1.00[CHB][hapmap]
rs851909	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[ASN][1000 genomes]
rs851910	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[ASN][1000 genomes]
rs851911	1.00[CEU][hapmap];1.00[CHB][hapmap];0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs851914	1.00[ASN][1000 genomes]
rs969173	1.00[CEU][hapmap];1.00[CHB][hapmap]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1039741	chr12:62046850-62491052	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats Strong transcription Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:62311600-62313000	Weak transcription	Liver	Liver

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