Variant report

Variant rs11174583
Chromosome Location chr12:63051064-63051065
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:67 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:63035200-63069800 Weak transcription Left Ventricle heart
2 chr12:63037200-63069600 Weak transcription Fetal Intestine Large intestine
3 chr12:63039200-63070000 Weak transcription Pancreas Pancrea
4 chr12:63041600-63053600 Weak transcription Osteobl bone
5 chr12:63045000-63053400 Weak transcription Fetal Kidney kidney
6 chr12:63045800-63054000 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
7 chr12:63046000-63054000 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
8 chr12:63047000-63051800 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
9 chr12:63047200-63054000 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
10 chr12:63047400-63053800 Enhancers Cortex derived primary cultured neurospheres brain
11 chr12:63047600-63051400 Strong transcription Fetal Intestine Small intestine
12 chr12:63047600-63054000 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
13 chr12:63047600-63058000 Weak transcription A549 lung
14 chr12:63047800-63053400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
15 chr12:63047800-63057200 Weak transcription Lung lung
16 chr12:63047800-63062000 Weak transcription Stomach Mucosa stomach
17 chr12:63047800-63069600 Weak transcription Liver Liver
18 chr12:63048000-63054000 Enhancers Brain Substantia Nigra brain
19 chr12:63048400-63051200 Enhancers Fetal Muscle Leg muscle
20 chr12:63048600-63051400 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
21 chr12:63049000-63052000 Enhancers Brain Anterior Caudate brain
22 chr12:63049000-63054800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
23 chr12:63049000-63069600 Weak transcription Primary hematopoietic stem cells blood
24 chr12:63049000-63070000 Weak transcription Gastric stomach
25 chr12:63049200-63051400 Enhancers Brain Hippocampus Middle brain
26 chr12:63049200-63052400 Weak transcription Aorta Aorta
27 chr12:63049200-63052600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
28 chr12:63049200-63053000 Enhancers HUES6 Cell Line embryonic stem cell
29 chr12:63049200-63054600 Enhancers H9 Cell Line embryonic stem cell
30 chr12:63049200-63055400 Enhancers ES-UCSF4 Cell Line embryonic stem cell
31 chr12:63049200-63070000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
32 chr12:63049400-63051400 Enhancers Brain Angular Gyrus brain
33 chr12:63049400-63051400 Enhancers Brain Inferior Temporal Lobe brain
34 chr12:63049400-63057000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
35 chr12:63049600-63051200 Enhancers iPS DF 6.9 Cell Line embryonic stem cell
36 chr12:63049600-63051200 Enhancers Fetal Brain Male brain
37 chr12:63049600-63051200 Enhancers Fetal Muscle Trunk muscle
38 chr12:63049600-63051800 Enhancers Brain Cingulate Gyrus brain
39 chr12:63049600-63053000 Enhancers HUES64 Cell Line embryonic stem cell
40 chr12:63049600-63055800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
41 chr12:63049800-63052400 Weak transcription Placenta Placenta
42 chr12:63049800-63055000 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
43 chr12:63049800-63055200 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
44 chr12:63050000-63052800 Enhancers HUES48 Cell Line embryonic stem cell
45 chr12:63050000-63070200 Weak transcription Ovary ovary
46 chr12:63050200-63051400 Enhancers Adipose Nuclei Adipose
47 chr12:63050200-63052800 Enhancers iPS-15b Cell Line embryonic stem cell
48 chr12:63050200-63053600 Enhancers iPS-18 Cell Line embryonic stem cell
49 chr12:63050200-63054800 Enhancers ES-I3 Cell Line embryonic stem cell
50 chr12:63050400-63051200 Enhancers Brain Dorsolateral Prefrontal Cortex brain

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