The 2.0 version of rSNPBase

Variant report

Variant rs11175259
Chromosome Location chr12:64505468-64505469
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:76 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:64457000-64510600 Weak transcription HepG2 liver
2 chr12:64474800-64521400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
3 chr12:64477400-64520800 Weak transcription Brain Inferior Temporal Lobe brain
4 chr12:64483000-64521400 Weak transcription Liver Liver
5 chr12:64483200-64520800 Weak transcription Brain Cingulate Gyrus brain
6 chr12:64483200-64521400 Weak transcription Rectal Mucosa Donor 29 rectum
7 chr12:64483600-64519800 Weak transcription Gastric stomach
8 chr12:64483600-64521400 Weak transcription Lung lung
9 chr12:64487400-64526600 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
10 chr12:64489000-64506400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
11 chr12:64491800-64523600 Weak transcription HUVEC blood vessel
12 chr12:64492400-64515400 Weak transcription Brain Anterior Caudate brain
13 chr12:64493000-64515800 Weak transcription Brain Hippocampus Middle brain
14 chr12:64493200-64509400 Weak transcription Fetal Stomach stomach
15 chr12:64493200-64523600 Weak transcription Brain Angular Gyrus brain
16 chr12:64493400-64509200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
17 chr12:64493600-64518800 Weak transcription Fetal Brain Male brain
18 chr12:64494000-64514200 Weak transcription Hela-S3 cervix
19 chr12:64494000-64521400 Weak transcription Psoas Muscle Psoas
20 chr12:64494200-64521400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
21 chr12:64496400-64520800 Weak transcription Spleen Spleen
22 chr12:64498400-64509600 Weak transcription Stomach Smooth Muscle stomach
23 chr12:64498400-64538400 Weak transcription Small Intestine intestine
24 chr12:64498600-64508600 Weak transcription HSMMtube muscle
25 chr12:64498600-64508800 Weak transcription NHLF lung
26 chr12:64498600-64509600 Weak transcription Ovary ovary
27 chr12:64498600-64521400 Weak transcription NH-A brain
28 chr12:64499000-64521400 Weak transcription Rectal Smooth Muscle rectum
29 chr12:64499800-64514000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
30 chr12:64502400-64510800 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
31 chr12:64502400-64510800 Strong transcription A549 lung
32 chr12:64502400-64511000 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
33 chr12:64502400-64513000 Strong transcription Breast Myoepithelial Primary Cells Breast
34 chr12:64502600-64505600 Strong transcription Rectal Mucosa Donor 31 rectum
35 chr12:64502600-64506000 Strong transcription NHEK skin
36 chr12:64502800-64506800 Strong transcription Cortex derived primary cultured neurospheres brain
37 chr12:64502800-64506800 Strong transcription Adipose Nuclei Adipose
38 chr12:64503000-64506600 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
39 chr12:64503200-64506800 Strong transcription Fetal Lung lung
40 chr12:64503200-64521400 Weak transcription Brain Substantia Nigra brain
41 chr12:64503400-64505800 Strong transcription Fetal Intestine Large intestine
42 chr12:64503600-64507600 Strong transcription Foreskin Fibroblast Primary Cells skin02 Skin
43 chr12:64503800-64507000 Strong transcription Fetal Muscle Trunk muscle
44 chr12:64503800-64507200 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
45 chr12:64504000-64505600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
46 chr12:64504000-64519800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
47 chr12:64504200-64505600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
48 chr12:64504200-64505600 Weak transcription HSMM muscle
49 chr12:64504200-64509600 Weak transcription Brain Germinal Matrix brain
50 chr12:64504200-64509600 Weak transcription Pancreas Pancrea

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Last update: Aug 31, 2015