Variant report

Variant	rs11182331
Chromosome Location	chr12:44317153-44317154
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr12:44311824..44313734-chr12:44316196..44317780,2	MCF-7	breast:
2	chr12:44311484..44313107-chr12:44314992..44317607,2	K562	blood:
3	chr12:44310016..44313786-chr12:44314229..44318943,4	K562	blood:

Extended variants
information (count: 36 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:36)

rs_ID	r²[population]
rs10785485	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs11182298	0.82[CHB][hapmap];1.00[GIH][hapmap];1.00[TSI][hapmap];0.81[ASN][1000 genomes]
rs11182299	0.82[CHB][hapmap];0.85[CHD][hapmap];1.00[GIH][hapmap];1.00[TSI][hapmap];0.81[ASN][1000 genomes]
rs11182300	0.82[CHB][hapmap];0.85[CHD][hapmap];1.00[GIH][hapmap];1.00[TSI][hapmap];0.81[ASN][1000 genomes]
rs11182303	0.82[CHB][hapmap];0.85[CHD][hapmap];1.00[GIH][hapmap];1.00[TSI][hapmap];0.81[ASN][1000 genomes]
rs11182304	0.81[ASN][1000 genomes]
rs11182308	1.00[AFR][1000 genomes];0.81[ASN][1000 genomes]
rs11182310	1.00[AFR][1000 genomes];0.81[ASN][1000 genomes]
rs11182323	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.86[ASN][1000 genomes]
rs11182334	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11182336	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11182340	1.00[CEU][hapmap];0.82[CHB][hapmap];1.00[JPT][hapmap];1.00[AFR][1000 genomes];0.81[AMR][1000 genomes];1.00[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs11182343	0.81[AMR][1000 genomes];0.89[ASN][1000 genomes]
rs11182347	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.81[AMR][1000 genomes];1.00[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs11182349	1.00[CEU][hapmap];1.00[CHB][hapmap];0.81[AMR][1000 genomes];1.00[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs11182351	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[AFR][1000 genomes];0.81[AMR][1000 genomes];1.00[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs11182352	1.00[AFR][1000 genomes];0.81[AMR][1000 genomes];1.00[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs11182419	1.00[AFR][1000 genomes]
rs12227646	0.82[CHB][hapmap];1.00[AFR][1000 genomes];0.81[ASN][1000 genomes]
rs12228658	0.82[CHB][hapmap];0.86[CHD][hapmap];1.00[GIH][hapmap];0.81[ASN][1000 genomes]
rs12229491	1.00[AFR][1000 genomes];0.81[ASN][1000 genomes]
rs12229940	0.81[ASN][1000 genomes]
rs12230284	0.82[CHB][hapmap];0.81[ASN][1000 genomes]
rs12230727	0.82[CHB][hapmap];0.81[ASN][1000 genomes]
rs12230751	0.81[ASN][1000 genomes]
rs12231136	1.00[AFR][1000 genomes]
rs17093804	0.82[CHB][hapmap];1.00[AFR][1000 genomes];0.81[ASN][1000 genomes]
rs1948516	0.82[CHB][hapmap];1.00[AFR][1000 genomes];0.81[ASN][1000 genomes]
rs2199390	1.00[AFR][1000 genomes]
rs3829807	1.00[AFR][1000 genomes];0.81[ASN][1000 genomes]
rs4519146	0.88[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs61930682	0.81[ASN][1000 genomes]
rs720944	0.82[CHB][hapmap];1.00[AFR][1000 genomes];0.81[ASN][1000 genomes]
rs7296222	0.81[ASN][1000 genomes]
rs7350559	0.86[ASN][1000 genomes]
rs766961	0.82[CHB][hapmap];0.81[ASN][1000 genomes]

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:44307400-44324000	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
2	chr12:44308400-44318400	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
3	chr12:44311400-44324600	Weak transcription	Left Ventricle	heart
4	chr12:44314800-44317200	Enhancers	HUES64 Cell Line	embryonic stem cell
5	chr12:44315200-44324200	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
6	chr12:44316000-44321200	Weak transcription	HSMMtube	muscle

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