Variant report

Variant rs2199390
Chromosome Location chr12:44235245-44235246
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:47 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:44230400-44243800 Weak transcription Sigmoid Colon Sigmoid Colon
2 chr12:44230400-44244200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
3 chr12:44230400-44250800 Weak transcription Gastric stomach
4 chr12:44230600-44241200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
5 chr12:44230800-44235600 Weak transcription Fetal Lung lung
6 chr12:44230800-44241200 Weak transcription Placenta Placenta
7 chr12:44230800-44243800 Weak transcription Ovary ovary
8 chr12:44230800-44250800 Weak transcription Pancreas Pancrea
9 chr12:44230800-44254800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
10 chr12:44230800-44260200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
11 chr12:44231000-44235400 Weak transcription NHDF-Ad bronchial
12 chr12:44231000-44239200 Weak transcription Stomach Smooth Muscle stomach
13 chr12:44231000-44240200 Weak transcription Hela-S3 cervix
14 chr12:44231000-44240800 Weak transcription Primary B cells from peripheral blood blood
15 chr12:44231000-44241200 Weak transcription Primary T killer naive cells fromperipheralblood blood
16 chr12:44231000-44242800 Weak transcription Colon Smooth Muscle Colon
17 chr12:44231000-44245800 Weak transcription Adipose Nuclei Adipose
18 chr12:44231000-44245800 Weak transcription Rectal Mucosa Donor 29 rectum
19 chr12:44231000-44249800 Weak transcription Duodenum Mucosa Duodenum
20 chr12:44231000-44251800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
21 chr12:44231000-44252200 Weak transcription Rectal Smooth Muscle rectum
22 chr12:44231000-44254600 Weak transcription GM12878-XiMat blood
23 chr12:44231200-44238000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
24 chr12:44231200-44238400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
25 chr12:44231200-44238600 Weak transcription Rectal Mucosa Donor 31 rectum
26 chr12:44231200-44261600 Weak transcription Duodenum Smooth Muscle Duodenum
27 chr12:44231400-44235400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
28 chr12:44231400-44245800 Weak transcription Primary T cells fromperipheralblood blood
29 chr12:44231400-44245800 Weak transcription Liver Liver
30 chr12:44231600-44236000 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
31 chr12:44231800-44235600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
32 chr12:44231800-44235800 Weak transcription Pancreatic Islets Pancreatic Islet
33 chr12:44231800-44241000 Weak transcription Fetal Intestine Small intestine
34 chr12:44232200-44238600 Weak transcription Fetal Intestine Large intestine
35 chr12:44232200-44239600 Weak transcription Brain Angular Gyrus brain
36 chr12:44232200-44240200 Weak transcription HMEC breast
37 chr12:44233400-44254400 Weak transcription Left Ventricle heart
38 chr12:44233600-44251200 Weak transcription Breast Myoepithelial Primary Cells Breast
39 chr12:44234200-44254000 Weak transcription Primary B cells from cord blood blood
40 chr12:44234400-44236000 Enhancers HSMMtube muscle
41 chr12:44234400-44238400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
42 chr12:44234600-44260000 Weak transcription Psoas Muscle Psoas
43 chr12:44234800-44236400 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
44 chr12:44235000-44235800 Enhancers HSMM muscle
45 chr12:44235200-44235600 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
46 chr12:44235200-44236200 Enhancers Osteobl bone
47 chr12:44235200-44238400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin

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