Variant report

Variant	rs11182890
Chromosome Location	chr12:45561136-45561137
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 13 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:13)

rs_ID	r²[population]
rs10492285	0.85[AFR][1000 genomes];0.86[AMR][1000 genomes]
rs11182891	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs11182892	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs12303978	0.80[AFR][1000 genomes]
rs12304106	0.95[AFR][1000 genomes]
rs17095524	1.00[YRI][hapmap];0.99[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7954026	1.00[YRI][hapmap];0.99[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7960346	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7969139	1.00[YRI][hapmap];0.99[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7971900	0.85[AFR][1000 genomes]
rs7974579	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7974800	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7975566	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]

No data

Chromatin state (count:13 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:45559600-45561600	Enhancers	Skeletal Muscle Female	skeletal muscle
2	chr12:45559800-45561200	Enhancers	Skeletal Muscle Male	skeletal muscle
3	chr12:45559800-45562800	Weak transcription	Left Ventricle	heart
4	chr12:45559800-45569400	Weak transcription	Right Ventricle	heart
5	chr12:45560000-45561200	Weak transcription	Right Atrium	heart
6	chr12:45560000-45569000	Weak transcription	Adipose Nuclei	Adipose
7	chr12:45560200-45569200	Weak transcription	Breast Myoepithelial Primary Cells	Breast
8	chr12:45560200-45570400	Weak transcription	Duodenum Smooth Muscle	Duodenum
9	chr12:45560600-45569400	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
10	chr12:45560800-45562600	Weak transcription	HSMMtube	muscle
11	chr12:45560800-45568000	Weak transcription	Fetal Muscle Leg	muscle
12	chr12:45560800-45571200	Weak transcription	Psoas Muscle	Psoas
13	chr12:45561000-45569600	Weak transcription	Aorta	Aorta

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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