Variant report

Variant	rs11183867
Chromosome Location	chr12:47729596-47729597
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 31 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:30)

rs_ID	r²[population]
rs11183852	0.82[ASN][1000 genomes]
rs11183859	0.84[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs11183860	0.84[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs11183862	0.84[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs11183863	0.84[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs11183866	0.84[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs11183869	0.84[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs11183870	0.90[AMR][1000 genomes];0.92[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs11183871	0.84[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs11561402	0.84[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs12809861	0.84[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs12810168	0.84[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs12814166	0.84[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs12815928	1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2079026	0.94[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs2079027	0.89[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs2079028	0.94[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs34762197	0.84[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs34878892	0.84[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs35743720	0.89[EUR][1000 genomes]
rs35889007	0.94[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs4768145	0.84[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs4768146	0.80[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs4768147	0.84[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs4768796	0.90[AMR][1000 genomes];0.97[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs4768797	0.90[AMR][1000 genomes];0.91[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs4768798	0.84[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs4768799	0.90[AMR][1000 genomes];0.97[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs4768800	0.84[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs71445736	0.84[AMR][1000 genomes];0.89[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2751100	chr12:47541390-47746157	Active TSS Weak transcription Enhancers Strong transcription Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	45 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:47723200-47742200	Weak transcription	Primary T cells from cord blood	blood

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