Variant report

Variant	rs11186661
Chromosome Location	chr10:93452308-93452309
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 13 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:12)

rs_ID	r²[population]
rs1028934	1.00[ASN][1000 genomes]
rs11186619	1.00[ASN][1000 genomes]
rs11186638	1.00[ASN][1000 genomes]
rs11186641	1.00[ASN][1000 genomes]
rs11186679	1.00[ASN][1000 genomes]
rs11186698	0.89[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs3802649	0.86[EUR][1000 genomes]
rs4382814	1.00[ASN][1000 genomes]
rs60854684	1.00[ASN][1000 genomes]
rs61874526	1.00[ASN][1000 genomes]
rs61874527	1.00[ASN][1000 genomes]
rs61874529	1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv895892	chr10:93432632-93470167	Weak transcription Flanking Active TSS Enhancers Bivalent Enhancer	Chromatin interactive region	n/a	inside rSNPs	n/a

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:93449400-93453000	Enhancers	NHEK	skin
2	chr10:93450200-93453000	Enhancers	Liver	Liver
3	chr10:93450200-93453600	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
4	chr10:93450200-93454000	Weak transcription	Muscle Satellite Cultured Cells	--
5	chr10:93450400-93452400	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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