Variant report

Variant	rs4382814
Chromosome Location	chr10:93387851-93387852
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:0)
CpG islands
(count:0)
Chromatin interactive
region (count:9)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

No data

(count:9 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr10:93387435..93391591-chr10:93392416..93396501,4	K562	blood:
2	chr10:93384412..93386495-chr10:93387142..93388723,2	K562	blood:
3	chr10:93377962..93379937-chr10:93386628..93388397,2	MCF-7	breast:
4	chr10:93312245..93313115-chr10:93387596..93388162,3	MCF-7	breast:
5	chr10:93311805..93313050-chr10:93387452..93388202,3	MCF-7	breast:
6	chr10:93386300..93388872-chr10:93393581..93396543,2	MCF-7	breast:
7	chr10:93386755..93389232-chr10:93390987..93394775,3	MCF-7	breast:
8	chr10:93387435..93390652-chr10:93392972..93396624,3	K562	blood:
9	chr10:93386594..93389041-chr10:93389303..93393326,7	MCF-7	breast:

No data

Variant related genes	Relation type
ENSG00000119938	Chromatin interaction

rs_ID	r²[population]
rs1028934	1.00[ASN][1000 genomes]
rs11186619	1.00[ASN][1000 genomes]
rs11186636	0.84[AFR][1000 genomes]
rs11186638	1.00[CEU][hapmap];0.89[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11186641	1.00[ASN][1000 genomes]
rs11186653	0.91[YRI][hapmap]
rs11186661	1.00[ASN][1000 genomes]
rs11186679	1.00[ASN][1000 genomes]
rs4933680	0.90[YRI][hapmap];0.84[AFR][1000 genomes]
rs60854684	1.00[ASN][1000 genomes]
rs61874526	1.00[ASN][1000 genomes]
rs61874527	1.00[ASN][1000 genomes]
rs61874529	1.00[ASN][1000 genomes]

Chromatin state (count:65 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:93368000-93388600	Weak transcription	Brain Angular Gyrus	brain
2	chr10:93377400-93389600	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
3	chr10:93377600-93388000	Weak transcription	HSMMtube	muscle
4	chr10:93378600-93389000	Weak transcription	Hela-S3	cervix
5	chr10:93382800-93388200	Weak transcription	Brain Inferior Temporal Lobe	brain
6	chr10:93383000-93388200	Weak transcription	Pancreatic Islets	Pancreatic Islet
7	chr10:93383000-93388600	Weak transcription	Brain Hippocampus Middle	brain
8	chr10:93383800-93388200	Strong transcription	Cortex derived primary cultured neurospheres	brain
9	chr10:93384000-93388600	Strong transcription	Ganglion Eminence derived primary cultured neurospheres	brain
10	chr10:93385000-93391800	Weak transcription	NH-A	brain
11	chr10:93385000-93392400	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
12	chr10:93385200-93388000	Strong transcription	Fetal Intestine Small	intestine
13	chr10:93385400-93389200	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
14	chr10:93385600-93388600	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
15	chr10:93386200-93388800	Strong transcription	Fetal Intestine Large	intestine
16	chr10:93386400-93392600	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
17	chr10:93386600-93389400	Weak transcription	Adipose Nuclei	Adipose
18	chr10:93386800-93388400	Genic enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
19	chr10:93386800-93388600	Genic enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
20	chr10:93386800-93389600	Genic enhancers	Pancreas	Pancrea
21	chr10:93387000-93388600	Genic enhancers	Left Ventricle	heart
22	chr10:93387000-93392600	Transcr. at gene 5' and 3'	Fetal Lung	lung
23	chr10:93387200-93391400	Transcr. at gene 5' and 3'	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
24	chr10:93387200-93391800	Weak transcription	Stomach Mucosa	stomach
25	chr10:93387400-93388000	Genic enhancers	Ovary	ovary
26	chr10:93387600-93388000	Genic enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
27	chr10:93387600-93388000	Transcr. at gene 5' and 3'	Foreskin Fibroblast Primary Cells skin02	Skin
28	chr10:93387600-93388000	Genic enhancers	Duodenum Smooth Muscle	Duodenum
29	chr10:93387600-93388000	Genic enhancers	Esophagus	oesophagus
30	chr10:93387600-93388000	Enhancers	Gastric	stomach
31	chr10:93387600-93388000	Flanking Active TSS	Right Atrium	heart
32	chr10:93387600-93388200	Flanking Active TSS	Foreskin Melanocyte Primary Cells skin01	Skin
33	chr10:93387600-93388200	Enhancers	Brain Dorsolateral Prefrontal Cortex	brain
34	chr10:93387600-93388200	Strong transcription	Fetal Stomach	stomach
35	chr10:93387600-93388200	Strong transcription	Osteobl	bone
36	chr10:93387600-93388400	Genic enhancers	Breast Myoepithelial Primary Cells	Breast
37	chr10:93387600-93388400	Genic enhancers	Muscle Satellite Cultured Cells	--
38	chr10:93387600-93388600	Strong transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
39	chr10:93387600-93388600	Strong transcription	Brain Anterior Caudate	brain
40	chr10:93387600-93388600	Weak transcription	Fetal Kidney	kidney
41	chr10:93387600-93388600	Active TSS	Fetal Muscle Trunk	muscle
42	chr10:93387600-93388800	Strong transcription	NHEK	skin
43	chr10:93387600-93389400	Strong transcription	HSMM	muscle
44	chr10:93387600-93390400	Transcr. at gene 5' and 3'	Skeletal Muscle Female	skeletal muscle
45	chr10:93387600-93390600	Transcr. at gene 5' and 3'	Skeletal Muscle Male	skeletal muscle
46	chr10:93387600-93390600	Transcr. at gene 5' and 3'	Stomach Smooth Muscle	stomach
47	chr10:93387600-93390600	Genic enhancers	HepG2	liver
48	chr10:93387600-93391200	Transcr. at gene 5' and 3'	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
49	chr10:93387800-93388000	Transcr. at gene 5' and 3'	Aorta	Aorta
50	chr10:93387800-93388000	Flanking Active TSS	Fetal Brain Male	brain

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