Variant report

Variant	rs11187680
Chromosome Location	chr10:95585881-95585882
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 16 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:16)

rs_ID	r²[population]
rs10786145	0.95[ASN][1000 genomes]
rs10882355	1.00[AFR][1000 genomes];0.89[AMR][1000 genomes];0.95[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs10882356	1.00[AFR][1000 genomes];0.89[AMR][1000 genomes];0.95[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs10882362	1.00[CHB][hapmap];0.85[ASN][1000 genomes]
rs11187721	1.00[CHB][hapmap];0.90[ASN][1000 genomes]
rs11187722	0.90[ASN][1000 genomes]
rs11187723	1.00[CHB][hapmap];0.90[ASN][1000 genomes]
rs11187728	1.00[CHB][hapmap];0.85[ASN][1000 genomes]
rs12356200	0.85[ASN][1000 genomes]
rs12413002	0.85[ASN][1000 genomes]
rs2113955	1.00[CHB][hapmap];0.85[ASN][1000 genomes]
rs34424393	0.82[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs35629779	0.82[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs4919616	0.85[ASN][1000 genomes]
rs7068140	0.90[ASN][1000 genomes]
rs7096071	0.82[EUR][1000 genomes];0.90[ASN][1000 genomes]

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:95585600-95586000	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
2	chr10:95585800-95586200	Enhancers	Primary hematopoietic stem cells	blood
3	chr10:95585800-95586400	Enhancers	iPS DF 6.9 Cell Line	embryonic stem cell
4	chr10:95585800-95586400	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
5	chr10:95585800-95586600	Bivalent Enhancer	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
6	chr10:95585800-95586600	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
7	chr10:95585800-95586600	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
8	chr10:95585800-95586800	Bivalent Enhancer	iPS-15b Cell Line	embryonic stem cell

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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