The 2.0 version of rSNPBase

Variant report

Variant rs11196758
Chromosome Location chr10:116237760-116237761
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:92 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:116194400-116251600 Weak transcription Small Intestine intestine
2 chr10:116199200-116243400 Weak transcription Brain Hippocampus Middle brain
3 chr10:116199600-116244600 Weak transcription A549 lung
4 chr10:116199800-116249200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
5 chr10:116201000-116242400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
6 chr10:116214600-116263600 Weak transcription Rectal Smooth Muscle rectum
7 chr10:116218400-116249200 Weak transcription Cortex derived primary cultured neurospheres brain
8 chr10:116222200-116264400 Weak transcription Duodenum Smooth Muscle Duodenum
9 chr10:116225000-116267200 Weak transcription Aorta Aorta
10 chr10:116225600-116242800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
11 chr10:116225600-116246800 Weak transcription NHEK skin
12 chr10:116225600-116278800 Weak transcription HSMM muscle
13 chr10:116227200-116247400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
14 chr10:116229400-116240800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
15 chr10:116229400-116244800 Weak transcription Thymus Thymus
16 chr10:116229800-116239200 Weak transcription Duodenum Mucosa Duodenum
17 chr10:116230000-116240800 Weak transcription Esophagus oesophagus
18 chr10:116230000-116243600 Weak transcription Lung lung
19 chr10:116230200-116239000 Weak transcription Gastric stomach
20 chr10:116230600-116241800 Weak transcription HSMMtube muscle
21 chr10:116231000-116238400 Weak transcription Primary T regulatory cells fromperipheralblood blood
22 chr10:116231000-116239800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
23 chr10:116231000-116241000 Weak transcription Primary hematopoietic stem cells blood
24 chr10:116231000-116244400 Weak transcription Primary hematopoietic stem cells short term culture blood
25 chr10:116231200-116239000 Weak transcription Brain Angular Gyrus brain
26 chr10:116231200-116239200 Weak transcription Brain Inferior Temporal Lobe brain
27 chr10:116231200-116243600 Weak transcription Fetal Thymus thymus
28 chr10:116231200-116251600 Weak transcription GM12878-XiMat blood
29 chr10:116231400-116244400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
30 chr10:116231800-116240600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
31 chr10:116231800-116244800 Weak transcription Primary T killer memory cells from peripheral blood blood
32 chr10:116231800-116249200 Weak transcription Pancreas Pancrea
33 chr10:116232000-116238600 Weak transcription Breast Myoepithelial Primary Cells Breast
34 chr10:116232400-116238400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
35 chr10:116232400-116238600 Weak transcription Primary T killer naive cells fromperipheralblood blood
36 chr10:116232400-116246800 Weak transcription HMEC breast
37 chr10:116232600-116239000 Weak transcription Psoas Muscle Psoas
38 chr10:116232600-116244600 Weak transcription Colonic Mucosa Colon
39 chr10:116232800-116238200 Weak transcription Primary B cells from peripheral blood blood
40 chr10:116232800-116238800 Weak transcription Pancreatic Islets Pancreatic Islet
41 chr10:116232800-116239800 Weak transcription Rectal Mucosa Donor 31 rectum
42 chr10:116232800-116244600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
43 chr10:116232800-116244800 Weak transcription Hela-S3 cervix
44 chr10:116232800-116245600 Weak transcription Brain Anterior Caudate brain
45 chr10:116233000-116238000 Weak transcription Sigmoid Colon Sigmoid Colon
46 chr10:116233000-116238800 Weak transcription Fetal Kidney kidney
47 chr10:116233000-116239000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
48 chr10:116233000-116239000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
49 chr10:116233000-116239000 Weak transcription Fetal Lung lung
50 chr10:116233000-116243800 Weak transcription HUES6 Cell Line embryonic stem cell

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Last update: Aug 31, 2015