Variant report

Variant	rs11197212
Chromosome Location	chr10:117200932-117200933
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 24 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:24)

rs_ID	r²[population]
rs10885688	0.89[EUR][1000 genomes]
rs10885699	1.00[CEU][hapmap];1.00[CHB][hapmap];0.84[JPT][hapmap]
rs10885701	0.91[CEU][hapmap];1.00[CHB][hapmap];0.84[JPT][hapmap];0.86[AMR][1000 genomes];0.92[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs10885704	0.86[AMR][1000 genomes];0.88[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs11197145	0.81[EUR][1000 genomes]
rs11197181	0.83[CEU][hapmap];0.93[CHB][hapmap];0.85[JPT][hapmap]
rs11197187	0.86[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs11197189	1.00[CEU][hapmap]
rs11197194	0.89[AMR][1000 genomes];0.92[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs11197195	0.90[AMR][1000 genomes];0.92[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs11197204	0.86[AMR][1000 genomes];0.92[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs11197205	0.83[CEU][hapmap];0.93[CHB][hapmap];0.85[JPT][hapmap];0.86[AMR][1000 genomes];0.87[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs11197206	0.91[CEU][hapmap];1.00[CHB][hapmap];0.82[JPT][hapmap]
rs11197208	0.91[CEU][hapmap];1.00[CHB][hapmap]
rs11197213	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.83[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11197216	0.96[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs11197217	0.85[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12356495	0.91[CEU][hapmap];0.93[CHB][hapmap];0.85[JPT][hapmap];0.87[EUR][1000 genomes]
rs12764552	0.86[EUR][1000 genomes]
rs12780535	0.83[EUR][1000 genomes]
rs2131835	0.88[EUR][1000 genomes]
rs2291669	0.91[CEU][hapmap];0.93[CHB][hapmap];0.84[JPT][hapmap];0.86[EUR][1000 genomes]
rs34373737	0.89[EUR][1000 genomes]
rs35954673	0.87[AMR][1000 genomes];0.90[EUR][1000 genomes]

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:117200600-117201600	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived

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