The 2.0 version of rSNPBase

Variant report

Variant rs11202926
Chromosome Location chr10:90777663-90777664
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:95 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:90754000-90779400 Weak transcription HepG2 liver
2 chr10:90754000-90789600 Weak transcription A549 lung
3 chr10:90756200-90781800 Weak transcription Stomach Mucosa stomach
4 chr10:90760400-90780400 Weak transcription Brain Angular Gyrus brain
5 chr10:90761600-90779000 Weak transcription Dnd41 blood
6 chr10:90761600-90779400 Weak transcription Primary hematopoietic stem cells blood
7 chr10:90761800-90779600 Weak transcription HSMMtube muscle
8 chr10:90761800-90779800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
9 chr10:90761800-90783800 Weak transcription Gastric stomach
10 chr10:90761800-90786200 Strong transcription Monocytes-CD14+_RO01746 blood
11 chr10:90762400-90785800 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
12 chr10:90762600-90779400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
13 chr10:90762600-90780400 Weak transcription Brain Hippocampus Middle brain
14 chr10:90762600-90786000 Strong transcription Breast Myoepithelial Primary Cells Breast
15 chr10:90762800-90778400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
16 chr10:90762800-90781000 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
17 chr10:90762800-90782000 Weak transcription Primary T killer naive cells fromperipheralblood blood
18 chr10:90763000-90779600 Weak transcription Primary B cells from peripheral blood blood
19 chr10:90763600-90780800 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
20 chr10:90766000-90780400 Weak transcription Brain Inferior Temporal Lobe brain
21 chr10:90766200-90785600 Strong transcription GM12878-XiMat blood
22 chr10:90767200-90778000 Strong transcription Muscle Satellite Cultured Cells --
23 chr10:90767400-90778000 Strong transcription Primary Natural Killer cells fromperipheralblood blood
24 chr10:90767400-90779000 Strong transcription Liver Liver
25 chr10:90767400-90781000 Strong transcription Osteobl bone
26 chr10:90767600-90778800 Weak transcription HUES64 Cell Line embryonic stem cell
27 chr10:90767600-90780800 Strong transcription Primary T helper 17 cells PMA-I stimulated --
28 chr10:90767600-90786600 Strong transcription Primary T regulatory cells fromperipheralblood blood
29 chr10:90767800-90779600 Strong transcription Primary neutrophils fromperipheralblood blood
30 chr10:90767800-90781800 Weak transcription Small Intestine intestine
31 chr10:90768400-90780000 Weak transcription Psoas Muscle Psoas
32 chr10:90768400-90785000 Weak transcription Skeletal Muscle Male skeletal muscle
33 chr10:90768800-90779200 Weak transcription Cortex derived primary cultured neurospheres brain
34 chr10:90769200-90779600 Strong transcription Rectal Mucosa Donor 29 rectum
35 chr10:90769400-90781400 Strong transcription Rectal Mucosa Donor 31 rectum
36 chr10:90771600-90779400 Weak transcription Primary T helper naive cells from peripheral blood blood
37 chr10:90771600-90782600 Weak transcription H1 Cell Line embryonic stem cell
38 chr10:90771600-90784800 Weak transcription Skeletal Muscle Female skeletal muscle
39 chr10:90771600-90789600 Weak transcription Brain Anterior Caudate brain
40 chr10:90771800-90808600 Weak transcription Primary T cells from cord blood blood
41 chr10:90772000-90779000 Weak transcription NHEK skin
42 chr10:90772400-90778400 Weak transcription NHLF lung
43 chr10:90772400-90795000 Weak transcription Placenta Placenta
44 chr10:90772600-90778600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
45 chr10:90772600-90779400 Weak transcription Primary T helper cells PMA-I stimulated --
46 chr10:90772600-90779600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
47 chr10:90772600-90780000 Weak transcription Adipose Nuclei Adipose
48 chr10:90772600-90784600 Weak transcription Fetal Muscle Trunk muscle
49 chr10:90772600-90789600 Weak transcription Fetal Stomach stomach
50 chr10:90772600-90791800 Weak transcription Esophagus oesophagus

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Last update: Aug 31, 2015