The 2.0 version of rSNPBase

Variant report

Variant rs11211144
Chromosome Location chr1:46057226-46057227
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:46050800-46060200 Weak transcription Aorta Aorta
2 chr1:46051400-46069800 Weak transcription ES-WA7 Cell Line embryonic stem cell
3 chr1:46051600-46060000 Weak transcription HSMMtube muscle
4 chr1:46051600-46060200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
5 chr1:46051800-46060000 Weak transcription Fetal Kidney kidney
6 chr1:46052000-46081000 Weak transcription Small Intestine intestine
7 chr1:46052200-46057600 Weak transcription Lung lung
8 chr1:46052200-46058400 Weak transcription Breast Myoepithelial Primary Cells Breast
9 chr1:46052200-46060000 Weak transcription Esophagus oesophagus
10 chr1:46052200-46063800 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
11 chr1:46052200-46084200 Weak transcription Right Atrium heart
12 chr1:46052400-46057800 Weak transcription Brain Anterior Caudate brain
13 chr1:46052400-46058400 Weak transcription Fetal Lung lung
14 chr1:46052400-46058400 Weak transcription Rectal Smooth Muscle rectum
15 chr1:46052400-46059600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
16 chr1:46052400-46060200 Weak transcription Colonic Mucosa Colon
17 chr1:46052400-46060800 Weak transcription Primary neutrophils fromperipheralblood blood
18 chr1:46052400-46080600 Weak transcription Placenta Amnion Placenta Amnion
19 chr1:46052600-46060200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
20 chr1:46052800-46057400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
21 chr1:46052800-46057800 Weak transcription Muscle Satellite Cultured Cells --
22 chr1:46052800-46058000 Weak transcription Adipose Nuclei Adipose
23 chr1:46052800-46058000 Weak transcription Osteobl bone
24 chr1:46052800-46058600 Weak transcription HMEC breast
25 chr1:46052800-46059200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
26 chr1:46052800-46060000 Weak transcription Duodenum Smooth Muscle Duodenum
27 chr1:46052800-46060200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
28 chr1:46052800-46060200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
29 chr1:46052800-46060200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
30 chr1:46052800-46060200 Weak transcription Ovary ovary
31 chr1:46052800-46060400 Weak transcription HUVEC blood vessel
32 chr1:46052800-46065200 Strong transcription Fetal Thymus thymus
33 chr1:46052800-46066600 Weak transcription NHDF-Ad bronchial
34 chr1:46052800-46066800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
35 chr1:46052800-46067800 Weak transcription NHLF lung
36 chr1:46052800-46078400 Weak transcription Brain Cingulate Gyrus brain
37 chr1:46052800-46081000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
38 chr1:46052800-46086000 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
39 chr1:46052800-46089200 Strong transcription HUES6 Cell Line embryonic stem cell
40 chr1:46052800-46099400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
41 chr1:46053000-46058000 Weak transcription Rectal Mucosa Donor 29 rectum
42 chr1:46053000-46061000 Strong transcription Fetal Intestine Small intestine
43 chr1:46053000-46062400 Strong transcription Primary hematopoietic stem cells short term culture blood
44 chr1:46053200-46057400 Weak transcription Fetal Brain Female brain
45 chr1:46053200-46057800 Weak transcription Primary hematopoietic stem cells blood
46 chr1:46053200-46058400 Weak transcription Primary T helper naive cells from peripheral blood blood
47 chr1:46053200-46059400 Weak transcription Primary monocytes fromperipheralblood blood
48 chr1:46053200-46059600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
49 chr1:46053200-46059600 Weak transcription Spleen Spleen
50 chr1:46053200-46127400 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived

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Last update: Aug 31, 2015