The 2.0 version of rSNPBase

Variant report

Variant rs12091335
Chromosome Location chr1:46011808-46011809
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:62 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:46000800-46016000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
2 chr1:46006400-46012200 Enhancers Primary B cells from peripheral blood blood
3 chr1:46006800-46012200 Enhancers Fetal Intestine Small intestine
4 chr1:46007200-46013600 Enhancers Fetal Adrenal Gland Adrenal Gland
5 chr1:46007600-46012000 Enhancers Fetal Intestine Large intestine
6 chr1:46008200-46012200 Enhancers Fetal Thymus thymus
7 chr1:46009600-46012200 Enhancers Liver Liver
8 chr1:46009600-46016000 Weak transcription Rectal Mucosa Donor 31 rectum
9 chr1:46010000-46012000 Enhancers Primary monocytes fromperipheralblood blood
10 chr1:46010000-46013200 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
11 chr1:46010000-46015200 Weak transcription K562 blood
12 chr1:46010000-46015800 Weak transcription Skeletal Muscle Female skeletal muscle
13 chr1:46010000-46016000 Weak transcription H1 Cell Line embryonic stem cell
14 chr1:46010000-46016000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
15 chr1:46010000-46016000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
16 chr1:46010000-46016000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
17 chr1:46010000-46016000 Weak transcription Duodenum Smooth Muscle Duodenum
18 chr1:46010000-46016000 Weak transcription Pancreas Pancrea
19 chr1:46010000-46016000 Weak transcription Thymus Thymus
20 chr1:46010000-46016000 Weak transcription NHLF lung
21 chr1:46010000-46016000 Weak transcription Osteobl bone
22 chr1:46010200-46012000 Enhancers Primary B cells from cord blood blood
23 chr1:46010200-46012200 Enhancers Primary hematopoietic stem cells blood
24 chr1:46010200-46012200 Enhancers Primary hematopoietic stem cells short term culture blood
25 chr1:46010200-46016000 Weak transcription Primary T killer naive cells fromperipheralblood blood
26 chr1:46010200-46016000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
27 chr1:46010200-46016000 Weak transcription Fetal Kidney kidney
28 chr1:46010200-46016200 Weak transcription Small Intestine intestine
29 chr1:46010400-46015400 Weak transcription Dnd41 blood
30 chr1:46010400-46016000 Weak transcription Primary T helper naive cells from peripheral blood blood
31 chr1:46010400-46016000 Weak transcription Lung lung
32 chr1:46010800-46014000 Weak transcription Colonic Mucosa Colon
33 chr1:46010800-46016000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
34 chr1:46010800-46016000 Weak transcription Primary T killer memory cells from peripheral blood blood
35 chr1:46010800-46016000 Weak transcription Brain Inferior Temporal Lobe brain
36 chr1:46011000-46012000 Weak transcription Spleen Spleen
37 chr1:46011000-46016000 Weak transcription Primary T helper naive cells fromperipheralblood blood
38 chr1:46011000-46016000 Weak transcription Primary T regulatory cells fromperipheralblood blood
39 chr1:46011000-46016200 Weak transcription ES-WA7 Cell Line embryonic stem cell
40 chr1:46011200-46016000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
41 chr1:46011200-46016000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
42 chr1:46011200-46016000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
43 chr1:46011400-46012000 Enhancers Monocytes-CD14+_RO01746 blood
44 chr1:46011400-46013000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
45 chr1:46011400-46013200 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
46 chr1:46011400-46015400 Weak transcription Primary T cells from cord blood blood
47 chr1:46011400-46015800 Weak transcription Primary T cells fromperipheralblood blood
48 chr1:46011400-46015800 Weak transcription Adipose Nuclei Adipose
49 chr1:46011400-46016000 Weak transcription HUES6 Cell Line embryonic stem cell
50 chr1:46011400-46016000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived

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Last update: Aug 31, 2015