Variant report

Variant	rs11211483
Chromosome Location	chr1:47707435-47707436
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 14 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:14)

rs_ID	r²[population]
rs10789505	1.00[CEU][hapmap];0.84[JPT][hapmap];0.92[EUR][1000 genomes]
rs11211478	0.94[AMR][1000 genomes];0.83[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs11578611	1.00[AMR][1000 genomes];0.83[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs11584578	0.94[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs11589932	1.00[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs12029934	1.00[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs12032890	0.94[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs12037936	0.94[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs2070930	1.00[CEU][hapmap];0.90[CHB][hapmap];0.89[CHD][hapmap];0.96[GIH][hapmap];0.94[JPT][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];1.00[AMR][1000 genomes];0.83[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs2208773	1.00[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs3737770	1.00[MEX][hapmap];0.88[AMR][1000 genomes]
rs6588124	1.00[CEU][hapmap];1.00[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs6682899	1.00[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs6692691	0.89[JPT][hapmap]

No data

Chromatin state (count:19 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:47705200-47766400	Weak transcription	Placenta Amnion	Placenta Amnion
2	chr1:47705600-47766400	Weak transcription	Primary T cells from cord blood	blood
3	chr1:47705800-47709400	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
4	chr1:47705800-47714800	Weak transcription	Fetal Thymus	thymus
5	chr1:47706400-47709200	Enhancers	Fetal Adrenal Gland	Adrenal Gland
6	chr1:47706800-47707600	Enhancers	Left Ventricle	heart
7	chr1:47706800-47707600	Enhancers	Right Atrium	heart
8	chr1:47706800-47707800	Enhancers	HUVEC	blood vessel
9	chr1:47706800-47708000	Enhancers	Primary hematopoietic stem cells short term culture	blood
10	chr1:47706800-47708200	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
11	chr1:47706800-47709800	Enhancers	Spleen	Spleen
12	chr1:47707000-47707600	Enhancers	Primary hematopoietic stem cells	blood
13	chr1:47707000-47707600	Bivalent Enhancer	Adipose Nuclei	Adipose
14	chr1:47707000-47707600	Enhancers	Hela-S3	cervix
15	chr1:47707000-47707800	Flanking Active TSS	K562	blood
16	chr1:47707000-47708200	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
17	chr1:47707400-47707600	Bivalent Enhancer	Foreskin Fibroblast Primary Cells skin01	Skin
18	chr1:47707400-47707600	Bivalent Enhancer	HepG2	liver
19	chr1:47707400-47709400	Weak transcription	H9 Cell Line	embryonic stem cell

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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