Variant report

Variant	rs11578611
Chromosome Location	chr1:47679550-47679551
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 15 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:15)

rs_ID	r²[population]
rs11211478	0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs11211483	1.00[AMR][1000 genomes];0.83[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs11584578	0.94[AMR][1000 genomes]
rs11589932	1.00[AMR][1000 genomes]
rs12029934	1.00[AMR][1000 genomes]
rs12032890	0.94[AMR][1000 genomes]
rs12037936	0.94[AMR][1000 genomes]
rs12042649	0.81[ASN][1000 genomes]
rs2070930	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs2208773	1.00[AMR][1000 genomes]
rs3737770	0.88[AMR][1000 genomes]
rs6588124	1.00[AMR][1000 genomes]
rs6682899	1.00[AMR][1000 genomes]
rs7527699	0.86[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs7531972	0.81[ASN][1000 genomes]

No data

Chromatin state (count:17 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:47674400-47690600	Weak transcription	Gastric	stomach
2	chr1:47675400-47680000	Enhancers	HUVEC	blood vessel
3	chr1:47675800-47680600	Enhancers	Primary hematopoietic stem cells	blood
4	chr1:47676400-47679600	Enhancers	Right Atrium	heart
5	chr1:47677600-47679600	Bivalent Enhancer	Fetal Adrenal Gland	Adrenal Gland
6	chr1:47677600-47681800	Weak transcription	Placenta Amnion	Placenta Amnion
7	chr1:47677800-47681600	Enhancers	Primary hematopoietic stem cells short term culture	blood
8	chr1:47678200-47680000	Weak transcription	Monocytes-CD14+_RO01746	blood
9	chr1:47678200-47680200	Weak transcription	Primary monocytes fromperipheralblood	blood
10	chr1:47678200-47681200	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
11	chr1:47678200-47681600	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
12	chr1:47678800-47679600	Flanking Active TSS	K562	blood
13	chr1:47679200-47680800	Enhancers	Placenta	Placenta
14	chr1:47679200-47686200	Weak transcription	Left Ventricle	heart
15	chr1:47679200-47687000	Weak transcription	Adipose Nuclei	Adipose
16	chr1:47679200-47689400	Weak transcription	Lung	lung
17	chr1:47679400-47684800	Weak transcription	Spleen	Spleen

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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