Variant report

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs11211918	0.85[AMR][1000 genomes];0.96[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs11211921	0.88[AMR][1000 genomes];0.96[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs11211923	0.85[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs11211927	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11211930	0.84[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs11211933	0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs11211946	0.89[AFR][1000 genomes];0.86[EUR][1000 genomes]
rs11211955	1.00[AFR][1000 genomes];0.89[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs11211956	1.00[AFR][1000 genomes];0.92[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs11211974	0.92[AFR][1000 genomes]
rs11211977	0.81[AFR][1000 genomes]
rs11211982	0.92[AFR][1000 genomes]
rs11211983	0.92[AFR][1000 genomes]
rs1940385	1.00[AFR][1000 genomes];0.95[AMR][1000 genomes];0.95[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs1944196	1.00[AFR][1000 genomes];0.89[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs1944208	0.92[AFR][1000 genomes]
rs4523665	0.92[AFR][1000 genomes]
rs4620686	0.92[AFR][1000 genomes]
rs72990356	0.88[AFR][1000 genomes]
rs7929737	1.00[AFR][1000 genomes];0.93[AMR][1000 genomes];0.93[EUR][1000 genomes];0.99[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv556230	chr11:106676942-106704250	Weak transcription Enhancers ZNF genes & repeats Genic enhancers	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:106679200-106692200	Weak transcription	Ovary	ovary

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