The 2.0 version of rSNPBase

Variant report

Variant rs11212166
Chromosome Location chr11:107202604-107202605
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:93 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:107169400-107230000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
2 chr11:107172800-107204200 Weak transcription NH-A brain
3 chr11:107173600-107231400 Weak transcription Brain Angular Gyrus brain
4 chr11:107179200-107229800 Weak transcription Psoas Muscle Psoas
5 chr11:107180000-107233200 Weak transcription Primary T killer memory cells from peripheral blood blood
6 chr11:107183400-107234400 Weak transcription HSMMtube muscle
7 chr11:107189800-107206200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
8 chr11:107190000-107223200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
9 chr11:107191200-107205800 Strong transcription Primary T cells fromperipheralblood blood
10 chr11:107191600-107203200 Strong transcription Primary T helper cells PMA-I stimulated --
11 chr11:107191600-107208600 Strong transcription Primary T helper cells fromperipheralblood blood
12 chr11:107192000-107224200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
13 chr11:107192200-107205400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
14 chr11:107192200-107207400 Strong transcription Primary Natural Killer cells fromperipheralblood blood
15 chr11:107192200-107208200 Weak transcription Spleen Spleen
16 chr11:107192200-107223800 Weak transcription Brain Substantia Nigra brain
17 chr11:107192200-107225600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
18 chr11:107192200-107229000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
19 chr11:107192200-107232200 Weak transcription Esophagus oesophagus
20 chr11:107192400-107203600 Weak transcription Pancreas Pancrea
21 chr11:107192400-107214600 Weak transcription Fetal Intestine Small intestine
22 chr11:107192600-107207400 Weak transcription Colonic Mucosa Colon
23 chr11:107193800-107209600 Weak transcription iPS-18 Cell Line embryonic stem cell
24 chr11:107193800-107229800 Weak transcription Right Ventricle heart
25 chr11:107193800-107237200 Weak transcription Gastric stomach
26 chr11:107194200-107205400 Weak transcription HepG2 liver
27 chr11:107194200-107213400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
28 chr11:107194400-107206200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
29 chr11:107194600-107208200 Weak transcription Lung lung
30 chr11:107194600-107208800 Weak transcription GM12878-XiMat blood
31 chr11:107194600-107221200 Weak transcription Rectal Smooth Muscle rectum
32 chr11:107194600-107235600 Weak transcription Aorta Aorta
33 chr11:107194800-107214800 Weak transcription Brain Anterior Caudate brain
34 chr11:107194800-107221000 Weak transcription Fetal Adrenal Gland Adrenal Gland
35 chr11:107194800-107221600 Weak transcription Brain Cingulate Gyrus brain
36 chr11:107194800-107223000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
37 chr11:107194800-107224000 Weak transcription Small Intestine intestine
38 chr11:107195000-107205800 Weak transcription HUVEC blood vessel
39 chr11:107195000-107223200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
40 chr11:107195000-107299200 Weak transcription Colon Smooth Muscle Colon
41 chr11:107195200-107205200 Weak transcription Primary T helper naive cells from peripheral blood blood
42 chr11:107195200-107206800 Weak transcription Fetal Muscle Leg muscle
43 chr11:107195200-107215200 Weak transcription Skeletal Muscle Male skeletal muscle
44 chr11:107195200-107222000 Weak transcription Primary T killer naive cells fromperipheralblood blood
45 chr11:107195200-107224000 Weak transcription Thymus Thymus
46 chr11:107195200-107225800 Weak transcription HSMM muscle
47 chr11:107195200-107233000 Weak transcription Fetal Muscle Trunk muscle
48 chr11:107195600-107218800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
49 chr11:107195800-107220000 Weak transcription HUES48 Cell Line embryonic stem cell
50 chr11:107197000-107228200 Weak transcription Fetal Stomach stomach

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Last update: Aug 31, 2015