The 2.0 version of rSNPBase

Variant report

Variant rs56753250
Chromosome Location chr11:107209225-107209226
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:79 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:107169400-107230000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
2 chr11:107173600-107231400 Weak transcription Brain Angular Gyrus brain
3 chr11:107179200-107229800 Weak transcription Psoas Muscle Psoas
4 chr11:107180000-107233200 Weak transcription Primary T killer memory cells from peripheral blood blood
5 chr11:107183400-107234400 Weak transcription HSMMtube muscle
6 chr11:107190000-107223200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
7 chr11:107192000-107224200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
8 chr11:107192200-107223800 Weak transcription Brain Substantia Nigra brain
9 chr11:107192200-107225600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
10 chr11:107192200-107229000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
11 chr11:107192200-107232200 Weak transcription Esophagus oesophagus
12 chr11:107192400-107214600 Weak transcription Fetal Intestine Small intestine
13 chr11:107193800-107209600 Weak transcription iPS-18 Cell Line embryonic stem cell
14 chr11:107193800-107229800 Weak transcription Right Ventricle heart
15 chr11:107193800-107237200 Weak transcription Gastric stomach
16 chr11:107194200-107213400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
17 chr11:107194600-107221200 Weak transcription Rectal Smooth Muscle rectum
18 chr11:107194600-107235600 Weak transcription Aorta Aorta
19 chr11:107194800-107214800 Weak transcription Brain Anterior Caudate brain
20 chr11:107194800-107221000 Weak transcription Fetal Adrenal Gland Adrenal Gland
21 chr11:107194800-107221600 Weak transcription Brain Cingulate Gyrus brain
22 chr11:107194800-107223000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
23 chr11:107194800-107224000 Weak transcription Small Intestine intestine
24 chr11:107195000-107223200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
25 chr11:107195000-107299200 Weak transcription Colon Smooth Muscle Colon
26 chr11:107195200-107215200 Weak transcription Skeletal Muscle Male skeletal muscle
27 chr11:107195200-107222000 Weak transcription Primary T killer naive cells fromperipheralblood blood
28 chr11:107195200-107224000 Weak transcription Thymus Thymus
29 chr11:107195200-107225800 Weak transcription HSMM muscle
30 chr11:107195200-107233000 Weak transcription Fetal Muscle Trunk muscle
31 chr11:107195600-107218800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
32 chr11:107195800-107220000 Weak transcription HUES48 Cell Line embryonic stem cell
33 chr11:107197000-107228200 Weak transcription Fetal Stomach stomach
34 chr11:107197600-107214800 Weak transcription Fetal Lung lung
35 chr11:107197800-107213400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
36 chr11:107197800-107215200 Weak transcription Rectal Mucosa Donor 29 rectum
37 chr11:107197800-107218800 Weak transcription Duodenum Mucosa Duodenum
38 chr11:107197800-107220800 Weak transcription Rectal Mucosa Donor 31 rectum
39 chr11:107198000-107219000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
40 chr11:107198200-107221200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
41 chr11:107198200-107233200 Weak transcription Placenta Placenta
42 chr11:107198200-107240800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
43 chr11:107198400-107213800 Weak transcription HUES64 Cell Line embryonic stem cell
44 chr11:107198600-107215000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
45 chr11:107198800-107221000 Weak transcription Sigmoid Colon Sigmoid Colon
46 chr11:107199400-107221200 Weak transcription Fetal Intestine Large intestine
47 chr11:107200000-107214600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
48 chr11:107200200-107221400 Weak transcription Brain Inferior Temporal Lobe brain
49 chr11:107200400-107210600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
50 chr11:107200400-107215400 Weak transcription Primary hematopoietic stem cells blood

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Last update: Aug 31, 2015