The 2.0 version of rSNPBase

Variant report

Variant rs11217836
Chromosome Location chr11:120229560-120229561
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:46 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:120216000-120239000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
2 chr11:120216400-120244800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
3 chr11:120217200-120232000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
4 chr11:120217400-120234000 Weak transcription Aorta Aorta
5 chr11:120217600-120257000 Weak transcription HSMM muscle
6 chr11:120218200-120229600 Weak transcription GM12878-XiMat blood
7 chr11:120218600-120231800 Weak transcription Rectal Smooth Muscle rectum
8 chr11:120218600-120232000 Weak transcription Fetal Stomach stomach
9 chr11:120218600-120232400 Weak transcription HUVEC blood vessel
10 chr11:120218800-120230600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
11 chr11:120220400-120232800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
12 chr11:120220600-120232000 Weak transcription Colon Smooth Muscle Colon
13 chr11:120224400-120232200 Weak transcription Fetal Heart heart
14 chr11:120224800-120231400 Weak transcription Cortex derived primary cultured neurospheres brain
15 chr11:120224800-120248800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
16 chr11:120224800-120260800 Weak transcription Sigmoid Colon Sigmoid Colon
17 chr11:120225000-120229600 Weak transcription Esophagus oesophagus
18 chr11:120225000-120229600 Weak transcription K562 blood
19 chr11:120225000-120248200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
20 chr11:120225200-120231800 Weak transcription Gastric stomach
21 chr11:120225200-120233800 Weak transcription NHEK skin
22 chr11:120225200-120234400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
23 chr11:120225200-120242200 Weak transcription A549 lung
24 chr11:120225200-120251000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
25 chr11:120225400-120231800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
26 chr11:120225800-120231800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
27 chr11:120225800-120232000 Weak transcription ES-I3 Cell Line embryonic stem cell
28 chr11:120225800-120232200 Weak transcription Osteobl bone
29 chr11:120225800-120242200 Weak transcription Fetal Intestine Small intestine
30 chr11:120226400-120242400 Weak transcription Fetal Intestine Large intestine
31 chr11:120226400-120246800 Weak transcription Small Intestine intestine
32 chr11:120227000-120229800 Enhancers Skeletal Muscle Female skeletal muscle
33 chr11:120227200-120231200 Weak transcription Ovary ovary
34 chr11:120227400-120229600 Enhancers HepG2 liver
35 chr11:120227800-120229600 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
36 chr11:120228000-120231000 Enhancers Skeletal Muscle Male skeletal muscle
37 chr11:120228600-120231800 Weak transcription Lung lung
38 chr11:120229200-120231000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
39 chr11:120229400-120229600 Enhancers Fetal Adrenal Gland Adrenal Gland
40 chr11:120229400-120229800 Enhancers Breast Myoepithelial Primary Cells Breast
41 chr11:120229400-120229800 Enhancers Stomach Smooth Muscle stomach
42 chr11:120229400-120230000 Enhancers Pancreas Pancrea
43 chr11:120229400-120230000 Enhancers Psoas Muscle Psoas
44 chr11:120229400-120230000 Enhancers Right Ventricle heart
45 chr11:120229400-120230200 Enhancers Left Ventricle heart
46 chr11:120229400-120230400 Enhancers Right Atrium heart

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Last update: Aug 31, 2015