Variant report

Variant	rs11218264
Chromosome Location	chr11:121209791-121209792
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 6 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:5)

rs_ID	r²[population]
rs11601232	1.00[AMR][1000 genomes]
rs11602399	1.00[AMR][1000 genomes]
rs12276094	1.00[AMR][1000 genomes]
rs12280049	1.00[AMR][1000 genomes]
rs7125578	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv898425	chr11:121115206-121215237	Enhancers Flanking Active TSS Weak transcription Genic enhancers ZNF genes & repeats Active TSS Transcr. at gene 5' and 3' Strong transcription Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	6 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:20 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:121199400-121215800	Weak transcription	Pancreatic Islets	Pancreatic Islet
2	chr11:121200400-121210000	Weak transcription	Primary B cells from cord blood	blood
3	chr11:121205600-121209800	Weak transcription	Primary B cells from peripheral blood	blood
4	chr11:121205600-121210200	Weak transcription	Primary hematopoietic stem cells	blood
5	chr11:121205600-121212000	Weak transcription	Primary T helper cells PMA-I stimulated	--
6	chr11:121207800-121209800	Enhancers	Cortex derived primary cultured neurospheres	brain
7	chr11:121207800-121210200	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
8	chr11:121208000-121210200	Weak transcription	Primary hematopoietic stem cells short term culture	blood
9	chr11:121208000-121210200	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
10	chr11:121208200-121210200	Enhancers	Brain Anterior Caudate	brain
11	chr11:121208600-121210200	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
12	chr11:121208800-121210600	Weak transcription	Brain Germinal Matrix	brain
13	chr11:121209200-121213000	Enhancers	GM12878-XiMat	blood
14	chr11:121209200-121213600	Weak transcription	Brain Substantia Nigra	brain
15	chr11:121209400-121209800	Weak transcription	Primary monocytes fromperipheralblood	blood
16	chr11:121209400-121210200	Weak transcription	Fetal Lung	lung
17	chr11:121209400-121210600	Weak transcription	Adipose Nuclei	Adipose
18	chr11:121209400-121213600	Weak transcription	Brain Cingulate Gyrus	brain
19	chr11:121209600-121210000	Weak transcription	Fetal Muscle Leg	muscle
20	chr11:121209600-121210000	Weak transcription	Monocytes-CD14+_RO01746	blood

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