Variant report

Variant rs11229871
Chromosome Location chr11:58965938-58965939
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:101 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:58943600-58975400 Weak transcription NHEK skin
2 chr11:58949400-58973400 Weak transcription Right Ventricle heart
3 chr11:58950000-58978400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
4 chr11:58950400-58972200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
5 chr11:58954600-58966200 Strong transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
6 chr11:58955000-58967200 Strong transcription Breast Myoepithelial Primary Cells Breast
7 chr11:58955400-58966000 Strong transcription HUES64 Cell Line embryonic stem cell
8 chr11:58955400-58966000 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
9 chr11:58955400-58970800 Strong transcription iPS-18 Cell Line embryonic stem cell
10 chr11:58956400-58977400 Weak transcription Hela-S3 cervix
11 chr11:58957000-58967600 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
12 chr11:58958600-58968400 Strong transcription Sigmoid Colon Sigmoid Colon
13 chr11:58959200-58967600 Strong transcription Duodenum Mucosa Duodenum
14 chr11:58959400-58968400 Strong transcription Fetal Intestine Large intestine
15 chr11:58959400-58968800 Weak transcription HepG2 liver
16 chr11:58959600-58974600 Strong transcription Rectal Mucosa Donor 31 rectum
17 chr11:58959800-58968400 Strong transcription Fetal Intestine Small intestine
18 chr11:58959800-58968400 Strong transcription Rectal Mucosa Donor 29 rectum
19 chr11:58960400-58974800 Weak transcription Aorta Aorta
20 chr11:58962000-58967600 Strong transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
21 chr11:58962200-58969400 Genic enhancers Adipose Nuclei Adipose
22 chr11:58962800-58975000 Genic enhancers Primary B cells from peripheral blood blood
23 chr11:58963000-58968800 Weak transcription Esophagus oesophagus
24 chr11:58963200-58968400 Weak transcription Spleen Spleen
25 chr11:58963200-58972200 Weak transcription Small Intestine intestine
26 chr11:58963400-58973800 Weak transcription Primary T cells from cord blood blood
27 chr11:58963600-58969000 Genic enhancers Primary B cells from cord blood blood
28 chr11:58964200-58968400 Weak transcription Colonic Mucosa Colon
29 chr11:58964200-58976000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
30 chr11:58964400-58967200 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
31 chr11:58964400-58968200 Weak transcription Placenta Amnion Placenta Amnion
32 chr11:58964400-58977400 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
33 chr11:58964600-58966000 Genic enhancers Brain Anterior Caudate brain
34 chr11:58964600-58966800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
35 chr11:58964600-58967000 Weak transcription Monocytes-CD14+_RO01746 blood
36 chr11:58964600-58968600 Weak transcription Duodenum Smooth Muscle Duodenum
37 chr11:58964600-58968800 Weak transcription HMEC breast
38 chr11:58964600-58969200 Weak transcription H1 Cell Line embryonic stem cell
39 chr11:58964600-58971800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
40 chr11:58964600-58972000 Weak transcription iPS-15b Cell Line embryonic stem cell
41 chr11:58964800-58966200 Genic enhancers H9 Derived Neuron Cultured Cells ES cell derived
42 chr11:58964800-58966200 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
43 chr11:58964800-58966800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
44 chr11:58964800-58967600 Genic enhancers Fetal Stomach stomach
45 chr11:58964800-58967800 Weak transcription Primary monocytes fromperipheralblood blood
46 chr11:58964800-58968400 Weak transcription Gastric stomach
47 chr11:58964800-58968600 Weak transcription HUES48 Cell Line embryonic stem cell
48 chr11:58964800-58972200 Weak transcription H9 Cell Line embryonic stem cell
49 chr11:58964800-58975600 Weak transcription ES-I3 Cell Line embryonic stem cell
50 chr11:58965000-58966000 Genic enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived

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