Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	11:64307888-64312302..11:64426650-64437729	K562	blood:
2	11:64307888-64312302..11:64523887-64530985	Hela-S3	cervix:
3	11:64307888-64312302..11:64402707-64415880	H1-hESC	embryonic stem cell:	embryo
4	11:64307888-64312302..11:64415880-64426617	H1-hESC	embryonic stem cell:	embryo
5	11:64207610-64216678..11:64307888-64312302	K562	blood:
6	11:64307888-64312302..11:64501239-64517861	Hela-S3	cervix:

rSNPs within LD-proxies of this variant (count:23)

rs_ID	r²[population]
rs11231808	0.85[AMR][1000 genomes];0.80[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs11231814	0.82[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs11231816	0.85[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs11231822	0.97[ASN][1000 genomes]
rs12362644	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12417589	0.84[AMR][1000 genomes];0.84[ASN][1000 genomes]
rs12808503	0.97[ASN][1000 genomes]
rs17300741	0.97[ASN][1000 genomes]
rs17300895	0.92[ASN][1000 genomes]
rs2277312	0.97[ASN][1000 genomes]
rs3759053	0.84[AFR][1000 genomes];0.97[ASN][1000 genomes]
rs3782099	0.97[ASN][1000 genomes]
rs4930194	0.86[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs4930195	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4930420	0.81[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs4930423	0.86[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs57827982	0.95[ASN][1000 genomes]
rs6591859	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7123852	0.84[AMR][1000 genomes];0.84[ASN][1000 genomes]
rs7929308	0.97[ASN][1000 genomes]
rs7936185	0.82[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs7940321	0.80[AFR][1000 genomes];0.97[ASN][1000 genomes]
rs7943154	0.92[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv832187	chr11:64121969-64312300	Genic enhancers Weak transcription Enhancers Flanking Active TSS Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Strong transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	50 gene(s)	inside rSNPs	diseases
2	nsv1035485	chr11:64228847-64354869	Weak transcription Enhancers Flanking Active TSS Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Strong transcription Bivalent/Poised TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	16 gene(s)	inside rSNPs	diseases
3	nsv897692	chr11:64305452-64386526	Bivalent/Poised TSS Genic enhancers Weak transcription Strong transcription Enhancers Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	12 gene(s)	inside rSNPs	diseases
4	nsv897693	chr11:64305452-64440920	Enhancers Bivalent Enhancer Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Weak transcription Genic enhancers Flanking Active TSS Strong transcription Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	20 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:10 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:64305000-64311200	Enhancers	Breast Myoepithelial Primary Cells	Breast
2	chr11:64307400-64315600	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
3	chr11:64309400-64311200	Enhancers	Placenta	Placenta
4	chr11:64310400-64313000	Weak transcription	Esophagus	oesophagus
5	chr11:64310600-64311400	Enhancers	HMEC	breast
6	chr11:64310600-64313000	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
7	chr11:64310600-64314400	Enhancers	NHEK	skin
8	chr11:64310800-64312000	Weak transcription	Hela-S3	cervix
9	chr11:64311000-64312200	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
10	chr11:64311000-64312200	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin

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