Variant report

Variant	rs11236760
Chromosome Location	chr11:76184052-76184053
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr11:76182591..76185058-chr11:76186358..76187920,2	K562	blood:

Extended variants
information (count: 7 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:6)

rs_ID	r²[population]
rs11236768	1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs11236769	1.00[YRI][hapmap];1.00[AFR][1000 genomes]
rs11236782	1.00[AFR][1000 genomes]
rs12272506	1.00[YRI][hapmap];1.00[AFR][1000 genomes]
rs12283862	1.00[YRI][hapmap];1.00[AFR][1000 genomes]
rs12284254	1.00[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1050713	chr11:76147085-76267117	Transcr. at gene 5' and 3' Weak transcription Flanking Active TSS Strong transcription ZNF genes & repeats Enhancers Active TSS Genic enhancers Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	45 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:125 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:76157200-76190200	Weak transcription	Placenta Amnion	Placenta Amnion
2	chr11:76157200-76191200	Weak transcription	Stomach Mucosa	stomach
3	chr11:76157400-76190200	Weak transcription	Colonic Mucosa	Colon
4	chr11:76158200-76190200	Weak transcription	H9 Cell Line	embryonic stem cell
5	chr11:76159800-76190400	Weak transcription	Colon Smooth Muscle	Colon
6	chr11:76164800-76188600	Weak transcription	Muscle Satellite Cultured Cells	--
7	chr11:76166800-76219400	Weak transcription	Small Intestine	intestine
8	chr11:76167200-76190200	Weak transcription	NHLF	lung
9	chr11:76167800-76192000	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
10	chr11:76168600-76187000	Strong transcription	Foreskin Melanocyte Primary Cells skin03	Skin
11	chr11:76168800-76234800	Weak transcription	Psoas Muscle	Psoas
12	chr11:76171200-76221200	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
13	chr11:76171400-76190200	Weak transcription	Fetal Heart	heart
14	chr11:76172400-76187800	Strong transcription	Primary B cells from peripheral blood	blood
15	chr11:76173200-76187000	Strong transcription	Primary Natural Killer cells fromperipheralblood	blood
16	chr11:76173400-76187200	Strong transcription	Primary neutrophils fromperipheralblood	blood
17	chr11:76173400-76188000	Strong transcription	Primary B cells from cord blood	blood
18	chr11:76173400-76191400	Strong transcription	Primary monocytes fromperipheralblood	blood
19	chr11:76173400-76191600	Strong transcription	Monocytes-CD14+_RO01746	blood
20	chr11:76173600-76191600	Strong transcription	Primary T helper cells fromperipheralblood	blood
21	chr11:76173800-76190000	Strong transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
22	chr11:76174800-76187000	Strong transcription	HUES48 Cell Line	embryonic stem cell
23	chr11:76174800-76188000	Strong transcription	HUES64 Cell Line	embryonic stem cell
24	chr11:76174800-76191400	Strong transcription	Primary T helper cells PMA-I stimulated	--
25	chr11:76175200-76190200	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
26	chr11:76175400-76190400	Weak transcription	ES-I3 Cell Line	embryonic stem cell
27	chr11:76175800-76190200	Weak transcription	Brain Substantia Nigra	brain
28	chr11:76176800-76185600	Strong transcription	GM12878-XiMat	blood
29	chr11:76177200-76187600	Strong transcription	H9 Derived Neuron Cultured Cells	ES cell derived
30	chr11:76177400-76195400	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
31	chr11:76178000-76187800	Weak transcription	K562	blood
32	chr11:76178000-76190200	Weak transcription	A549	lung
33	chr11:76178600-76185200	Weak transcription	HepG2	liver
34	chr11:76179600-76187600	Strong transcription	iPS-18 Cell Line	embryonic stem cell
35	chr11:76179800-76184800	Strong transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
36	chr11:76180200-76185800	Strong transcription	Breast Myoepithelial Primary Cells	Breast
37	chr11:76180200-76204200	Weak transcription	Pancreatic Islets	Pancreatic Islet
38	chr11:76180400-76184400	Weak transcription	Fetal Intestine Small	intestine
39	chr11:76180400-76191000	Weak transcription	HSMMtube	muscle
40	chr11:76181600-76187000	Strong transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
41	chr11:76181600-76187400	Strong transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
42	chr11:76181800-76186000	Strong transcription	Brain Hippocampus Middle	brain
43	chr11:76182000-76184600	Strong transcription	Rectal Mucosa Donor 31	rectum
44	chr11:76182000-76187800	Strong transcription	Cortex derived primary cultured neurospheres	brain
45	chr11:76182200-76187000	Strong transcription	Primary T killer naive cells fromperipheralblood	blood
46	chr11:76182200-76187400	Strong transcription	Placenta	Placenta
47	chr11:76182200-76188000	Strong transcription	Duodenum Mucosa	Duodenum
48	chr11:76182400-76184400	Strong transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
49	chr11:76182400-76185600	Strong transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
50	chr11:76182400-76187200	Strong transcription	Primary hematopoietic stem cells	blood

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