Variant report

Variant	rs11237600
Chromosome Location	chr11:70667088-70667089
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr11:70667088..70668727-chr11:70671264..70673345,2	MCF-7	breast:
2	chr11:70662476..70664151-chr11:70666393..70668011,2	MCF-7	breast:
3	chr11:70665124..70667994-chr11:70668288..70669892,2	MCF-7	breast:

Variant related genes	Relation type
ENSG00000162105	Chromatin interaction

rs_ID	r²[population]
rs10793347	0.87[AMR][1000 genomes]
rs11237599	0.89[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11237649	0.87[AMR][1000 genomes]
rs3019840	0.88[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs56308736	0.87[AMR][1000 genomes]
rs7929452	0.87[AMR][1000 genomes]
rs7932689	0.80[AMR][1000 genomes]

Chromatin state (count:26 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:70639600-70668400	Weak transcription	Placenta Amnion	Placenta Amnion
2	chr11:70640600-70670600	Weak transcription	iPS-18 Cell Line	embryonic stem cell
3	chr11:70644800-70669800	Weak transcription	Brain Germinal Matrix	brain
4	chr11:70651200-70668000	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
5	chr11:70653200-70670600	Weak transcription	Duodenum Mucosa	Duodenum
6	chr11:70653400-70668000	Weak transcription	Lung	lung
7	chr11:70653400-70680600	Weak transcription	iPS-15b Cell Line	embryonic stem cell
8	chr11:70654600-70669200	Strong transcription	Fetal Intestine Small	intestine
9	chr11:70655800-70670600	Weak transcription	Stomach Mucosa	stomach
10	chr11:70661600-70672400	Weak transcription	Rectal Mucosa Donor 29	rectum
11	chr11:70661800-70670600	Weak transcription	H1 Cell Line	embryonic stem cell
12	chr11:70662000-70672200	Weak transcription	Spleen	Spleen
13	chr11:70662200-70670800	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
14	chr11:70663200-70667200	Strong transcription	Liver	Liver
15	chr11:70664600-70667600	Weak transcription	Breast Myoepithelial Primary Cells	Breast
16	chr11:70664800-70669800	Weak transcription	Fetal Brain Male	brain
17	chr11:70665200-70672600	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
18	chr11:70665400-70684400	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
19	chr11:70666000-70668200	Weak transcription	HepG2	liver
20	chr11:70666200-70669800	Weak transcription	Stomach Smooth Muscle	stomach
21	chr11:70666400-70667400	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
22	chr11:70666400-70669600	Weak transcription	Pancreas	Pancrea
23	chr11:70666600-70667800	Strong transcription	iPS DF 19.11 Cell Line	embryonic stem cell
24	chr11:70666600-70668400	Weak transcription	Fetal Intestine Large	intestine
25	chr11:70667000-70669600	Weak transcription	Gastric	stomach
26	chr11:70667000-70670000	Weak transcription	Fetal Brain Female	brain

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