Variant report

Variant	rs7929452
Chromosome Location	chr11:70679766-70679767
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 14 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:14)

rs_ID	r²[population]
rs10751308	0.90[AFR][1000 genomes]
rs10793347	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11237599	0.85[AMR][1000 genomes]
rs11237600	0.87[AMR][1000 genomes]
rs11237649	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11237722	0.90[AFR][1000 genomes]
rs3017477	0.83[AFR][1000 genomes];0.83[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3019837	0.81[AFR][1000 genomes]
rs3019840	1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs56308736	1.00[AFR][1000 genomes];0.93[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6592814	0.90[AFR][1000 genomes]
rs7932689	1.00[AFR][1000 genomes];0.92[AMR][1000 genomes];0.93[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs9326493	1.00[AFR][1000 genomes];0.83[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs9734771	0.90[AFR][1000 genomes];0.83[ASN][1000 genomes]

No data

Chromatin state (count:18 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:70653400-70680600	Weak transcription	iPS-15b Cell Line	embryonic stem cell
2	chr11:70665400-70684400	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
3	chr11:70670000-70731800	Weak transcription	Gastric	stomach
4	chr11:70673000-70680400	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
5	chr11:70673000-70681200	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
6	chr11:70673000-70688800	Weak transcription	Pancreas	Pancrea
7	chr11:70673600-70679800	Weak transcription	HUES64 Cell Line	embryonic stem cell
8	chr11:70673800-70680600	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
9	chr11:70674000-70683800	Weak transcription	Fetal Intestine Large	intestine
10	chr11:70675000-70679800	Weak transcription	iPS-18 Cell Line	embryonic stem cell
11	chr11:70677400-70683200	Strong transcription	Fetal Intestine Small	intestine
12	chr11:70678400-70686200	Strong transcription	HepG2	liver
13	chr11:70679000-70682400	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
14	chr11:70679200-70681800	Enhancers	H1 Cell Line	embryonic stem cell
15	chr11:70679600-70680600	Enhancers	iPS-20b Cell Line	embryonic stem cell
16	chr11:70679600-70681400	Enhancers	H9 Cell Line	embryonic stem cell
17	chr11:70679600-70681400	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
18	chr11:70679600-70681800	Strong transcription	Liver	Liver

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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