Variant report

Variant	rs6592814
Chromosome Location	chr11:70690596-70690597
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 15 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:15)

rs_ID	r²[population]
rs10751308	1.00[AFR][1000 genomes];0.88[AMR][1000 genomes];0.93[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs10793347	0.90[AFR][1000 genomes]
rs11237649	0.90[AFR][1000 genomes]
rs11237722	1.00[AFR][1000 genomes];0.95[AMR][1000 genomes];0.95[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs12806832	0.82[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs2921326	0.83[EUR][1000 genomes]
rs3017478	0.88[EUR][1000 genomes]
rs3017479	0.82[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs3019837	0.90[AFR][1000 genomes];0.95[AMR][1000 genomes];0.95[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs3019840	0.90[AFR][1000 genomes]
rs56308736	0.90[AFR][1000 genomes]
rs7929452	0.90[AFR][1000 genomes]
rs7932689	0.90[AFR][1000 genomes]
rs9326493	0.90[AFR][1000 genomes]
rs9734771	1.00[AFR][1000 genomes];0.92[EUR][1000 genomes]

No data

Chromatin state (count:13 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:70670000-70731800	Weak transcription	Gastric	stomach
2	chr11:70681800-70701400	Weak transcription	Liver	Liver
3	chr11:70684800-70697000	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
4	chr11:70685200-70691600	Weak transcription	Fetal Brain Female	brain
5	chr11:70686400-70690800	Weak transcription	Right Atrium	heart
6	chr11:70688200-70696000	Weak transcription	HepG2	liver
7	chr11:70689200-70692000	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
8	chr11:70690000-70695200	Enhancers	Fetal Brain Male	brain
9	chr11:70690200-70690600	Enhancers	Cortex derived primary cultured neurospheres	brain
10	chr11:70690200-70692000	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
11	chr11:70690200-70696000	Weak transcription	Fetal Intestine Small	intestine
12	chr11:70690400-70690800	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
13	chr11:70690400-70696600	Weak transcription	Pancreas	Pancrea

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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