The 2.0 version of rSNPBase

Variant report

Variant rs11239958
Chromosome Location chr1:146719108-146719109
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:122 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:146715400-146722000 Weak transcription Lung lung
2 chr1:146715400-146724200 Weak transcription Esophagus oesophagus
3 chr1:146715600-146727400 Weak transcription Fetal Muscle Trunk muscle
4 chr1:146715600-146736200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
5 chr1:146715600-146749400 Weak transcription Colonic Mucosa Colon
6 chr1:146715800-146731400 Weak transcription Fetal Muscle Leg muscle
7 chr1:146715800-146756800 Weak transcription Placenta Amnion Placenta Amnion
8 chr1:146716000-146719200 Weak transcription Primary T cells fromperipheralblood blood
9 chr1:146716000-146719600 Enhancers Liver Liver
10 chr1:146716000-146719800 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
11 chr1:146716000-146720200 Weak transcription HUVEC blood vessel
12 chr1:146716000-146722000 Weak transcription Fetal Intestine Small intestine
13 chr1:146716000-146724200 Weak transcription Fetal Stomach stomach
14 chr1:146716000-146726000 Weak transcription Rectal Mucosa Donor 29 rectum
15 chr1:146716000-146727200 Weak transcription Fetal Intestine Large intestine
16 chr1:146716000-146727200 Weak transcription NH-A brain
17 chr1:146716000-146727400 Weak transcription Adipose Nuclei Adipose
18 chr1:146716000-146727400 Weak transcription Rectal Mucosa Donor 31 rectum
19 chr1:146716000-146727400 Weak transcription Rectal Smooth Muscle rectum
20 chr1:146716000-146727600 Weak transcription Breast Myoepithelial Primary Cells Breast
21 chr1:146716000-146731600 Weak transcription Fetal Kidney kidney
22 chr1:146716000-146731800 Weak transcription Fetal Adrenal Gland Adrenal Gland
23 chr1:146716000-146732400 Weak transcription Aorta Aorta
24 chr1:146716000-146732400 Weak transcription Fetal Brain Male brain
25 chr1:146716000-146735600 Weak transcription Ovary ovary
26 chr1:146716000-146739600 Weak transcription Colon Smooth Muscle Colon
27 chr1:146716000-146743800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
28 chr1:146716200-146719800 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
29 chr1:146716200-146727800 Weak transcription Muscle Satellite Cultured Cells --
30 chr1:146716200-146732200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
31 chr1:146716400-146724400 Weak transcription Stomach Smooth Muscle stomach
32 chr1:146716400-146727400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
33 chr1:146716400-146732200 Weak transcription NHLF lung
34 chr1:146716600-146719800 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
35 chr1:146716600-146731400 Weak transcription Fetal Brain Female brain
36 chr1:146716800-146719200 Weak transcription Primary T killer memory cells from peripheral blood blood
37 chr1:146716800-146719800 Enhancers Primary T helper cells PMA-I stimulated --
38 chr1:146716800-146731000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
39 chr1:146716800-146748600 Weak transcription Pancreatic Islets Pancreatic Islet
40 chr1:146717000-146719600 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
41 chr1:146717000-146726000 Weak transcription A549 lung
42 chr1:146717200-146719600 Enhancers Hela-S3 cervix
43 chr1:146717200-146722000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
44 chr1:146717200-146724200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
45 chr1:146717200-146727200 Weak transcription NHDF-Ad bronchial
46 chr1:146717200-146727200 Weak transcription Osteobl bone
47 chr1:146717200-146751000 Weak transcription Gastric stomach
48 chr1:146717600-146719800 Enhancers Primary T helper memory cells from peripheral blood 2 blood
49 chr1:146717600-146721000 Enhancers HepG2 liver
50 chr1:146717600-146730200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015