The 2.0 version of rSNPBase

Variant report

Variant rs12060046
Chromosome Location chr1:146720934-146720935
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:119 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:146715400-146722000 Weak transcription Lung lung
2 chr1:146715400-146724200 Weak transcription Esophagus oesophagus
3 chr1:146715600-146727400 Weak transcription Fetal Muscle Trunk muscle
4 chr1:146715600-146736200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
5 chr1:146715600-146749400 Weak transcription Colonic Mucosa Colon
6 chr1:146715800-146731400 Weak transcription Fetal Muscle Leg muscle
7 chr1:146715800-146756800 Weak transcription Placenta Amnion Placenta Amnion
8 chr1:146716000-146722000 Weak transcription Fetal Intestine Small intestine
9 chr1:146716000-146724200 Weak transcription Fetal Stomach stomach
10 chr1:146716000-146726000 Weak transcription Rectal Mucosa Donor 29 rectum
11 chr1:146716000-146727200 Weak transcription Fetal Intestine Large intestine
12 chr1:146716000-146727200 Weak transcription NH-A brain
13 chr1:146716000-146727400 Weak transcription Adipose Nuclei Adipose
14 chr1:146716000-146727400 Weak transcription Rectal Mucosa Donor 31 rectum
15 chr1:146716000-146727400 Weak transcription Rectal Smooth Muscle rectum
16 chr1:146716000-146727600 Weak transcription Breast Myoepithelial Primary Cells Breast
17 chr1:146716000-146731600 Weak transcription Fetal Kidney kidney
18 chr1:146716000-146731800 Weak transcription Fetal Adrenal Gland Adrenal Gland
19 chr1:146716000-146732400 Weak transcription Aorta Aorta
20 chr1:146716000-146732400 Weak transcription Fetal Brain Male brain
21 chr1:146716000-146735600 Weak transcription Ovary ovary
22 chr1:146716000-146739600 Weak transcription Colon Smooth Muscle Colon
23 chr1:146716000-146743800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
24 chr1:146716200-146727800 Weak transcription Muscle Satellite Cultured Cells --
25 chr1:146716200-146732200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
26 chr1:146716400-146724400 Weak transcription Stomach Smooth Muscle stomach
27 chr1:146716400-146727400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
28 chr1:146716400-146732200 Weak transcription NHLF lung
29 chr1:146716600-146731400 Weak transcription Fetal Brain Female brain
30 chr1:146716800-146731000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
31 chr1:146716800-146748600 Weak transcription Pancreatic Islets Pancreatic Islet
32 chr1:146717000-146726000 Weak transcription A549 lung
33 chr1:146717200-146722000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
34 chr1:146717200-146724200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
35 chr1:146717200-146727200 Weak transcription NHDF-Ad bronchial
36 chr1:146717200-146727200 Weak transcription Osteobl bone
37 chr1:146717200-146751000 Weak transcription Gastric stomach
38 chr1:146717600-146721000 Enhancers HepG2 liver
39 chr1:146717600-146730200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
40 chr1:146717600-146736600 Weak transcription Psoas Muscle Psoas
41 chr1:146717800-146732800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
42 chr1:146718000-146724200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
43 chr1:146719200-146727200 Weak transcription Cortex derived primary cultured neurospheres brain
44 chr1:146719200-146730000 Weak transcription HMEC breast
45 chr1:146719200-146730800 Weak transcription HSMM muscle
46 chr1:146719200-146731400 Weak transcription Right Ventricle heart
47 chr1:146719400-146722000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
48 chr1:146719400-146727200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
49 chr1:146719400-146727200 Weak transcription Skeletal Muscle Male skeletal muscle
50 chr1:146719400-146727400 Weak transcription Duodenum Smooth Muscle Duodenum

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Last update: Aug 31, 2015