The 2.0 version of rSNPBase

Variant report

Variant rs72691097
Chromosome Location chr1:146771388-146771389
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:63 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:146761600-146771400 Weak transcription Placenta Amnion Placenta Amnion
2 chr1:146765000-146772600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
3 chr1:146765400-146771400 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
4 chr1:146765600-146771600 Weak transcription Colonic Mucosa Colon
5 chr1:146766000-146777600 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
6 chr1:146766600-146772000 Weak transcription Fetal Brain Male brain
7 chr1:146767200-146772000 ZNF genes & repeats Primary hematopoietic stem cells short term culture blood
8 chr1:146767200-146772200 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
9 chr1:146767400-146772200 ZNF genes & repeats H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
10 chr1:146767600-146772200 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Female --
11 chr1:146767800-146772200 ZNF genes & repeats HUES64 Cell Line embryonic stem cell
12 chr1:146767800-146772400 ZNF genes & repeats hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
13 chr1:146767800-146772400 ZNF genes & repeats iPS-20b Cell Line embryonic stem cell
14 chr1:146767800-146774600 ZNF genes & repeats Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
15 chr1:146768600-146771400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
16 chr1:146768600-146772200 Weak transcription Primary T killer naive cells fromperipheralblood blood
17 chr1:146768800-146771400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
18 chr1:146768800-146771600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
19 chr1:146768800-146772000 Weak transcription Colon Smooth Muscle Colon
20 chr1:146768800-146772000 Weak transcription Right Ventricle heart
21 chr1:146769000-146771600 Weak transcription Primary T regulatory cells fromperipheralblood blood
22 chr1:146769000-146771600 Weak transcription Fetal Thymus thymus
23 chr1:146769000-146771800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
24 chr1:146769000-146771800 Weak transcription Fetal Lung lung
25 chr1:146769000-146772200 Weak transcription Brain Hippocampus Middle brain
26 chr1:146769400-146772800 ZNF genes & repeats H1 Cell Line embryonic stem cell
27 chr1:146769600-146771800 Weak transcription NHDF-Ad bronchial
28 chr1:146769600-146773400 Weak transcription Brain Inferior Temporal Lobe brain
29 chr1:146769800-146771400 Weak transcription Fetal Adrenal Gland Adrenal Gland
30 chr1:146769800-146771600 Weak transcription Brain Cingulate Gyrus brain
31 chr1:146769800-146772600 Weak transcription Brain Angular Gyrus brain
32 chr1:146770000-146771400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
33 chr1:146770000-146771400 Weak transcription Ovary ovary
34 chr1:146770000-146771600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
35 chr1:146770000-146771600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
36 chr1:146770000-146771600 Weak transcription Adipose Nuclei Adipose
37 chr1:146770000-146771600 Weak transcription Duodenum Smooth Muscle Duodenum
38 chr1:146770000-146771800 Weak transcription Primary T helper cells fromperipheralblood blood
39 chr1:146770000-146771800 Weak transcription Stomach Smooth Muscle stomach
40 chr1:146770000-146772000 Weak transcription Pancreatic Islets Pancreatic Islet
41 chr1:146770000-146772000 Weak transcription Osteobl bone
42 chr1:146770000-146772400 Weak transcription Muscle Satellite Cultured Cells --
43 chr1:146770000-146772600 Weak transcription NH-A brain
44 chr1:146770000-146772800 Weak transcription Rectal Smooth Muscle rectum
45 chr1:146770000-146773000 Weak transcription Brain Anterior Caudate brain
46 chr1:146770000-146773000 Weak transcription Brain Substantia Nigra brain
47 chr1:146770000-146773000 Weak transcription Skeletal Muscle Male skeletal muscle
48 chr1:146770200-146771400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
49 chr1:146770200-146771600 Weak transcription Primary B cells from cord blood blood
50 chr1:146770200-146771800 Weak transcription A549 lung

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Last update: Aug 31, 2015