The 2.0 version of rSNPBase

Variant report

Variant rs1138323
Chromosome Location chr1:160514087-160514088
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:44 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:160507600-160515400 Enhancers Fetal Intestine Large intestine
2 chr1:160507800-160515400 Enhancers Fetal Intestine Small intestine
3 chr1:160510200-160515000 Enhancers Stomach Mucosa stomach
4 chr1:160510200-160520400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
5 chr1:160510600-160515000 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
6 chr1:160510600-160515600 Enhancers Fetal Thymus thymus
7 chr1:160510600-160516000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
8 chr1:160510600-160516200 Weak transcription Placenta Placenta
9 chr1:160510800-160515400 Enhancers Primary T helper 17 cells PMA-I stimulated --
10 chr1:160511000-160515200 Enhancers Primary T helper memory cells from peripheral blood 2 blood
11 chr1:160511000-160515400 Enhancers Primary T helper cells PMA-I stimulated --
12 chr1:160511600-160514400 Weak transcription Primary monocytes fromperipheralblood blood
13 chr1:160511600-160514800 Weak transcription Monocytes-CD14+_RO01746 blood
14 chr1:160511800-160517800 Weak transcription Pancreas Pancrea
15 chr1:160511800-160522400 Weak transcription Gastric stomach
16 chr1:160511800-160527800 Weak transcription Colonic Mucosa Colon
17 chr1:160512000-160514600 Weak transcription Dnd41 blood
18 chr1:160512200-160514200 Weak transcription Primary T helper naive cells fromperipheralblood blood
19 chr1:160512200-160524600 Weak transcription Rectal Mucosa Donor 31 rectum
20 chr1:160512400-160514800 Weak transcription Primary T regulatory cells fromperipheralblood blood
21 chr1:160512600-160514200 Weak transcription Primary T killer memory cells from peripheral blood blood
22 chr1:160512800-160514200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
23 chr1:160512800-160516400 Weak transcription Rectal Mucosa Donor 29 rectum
24 chr1:160513000-160514400 Weak transcription HepG2 liver
25 chr1:160513000-160514600 Enhancers Small Intestine intestine
26 chr1:160513200-160514200 Weak transcription Liver Liver
27 chr1:160513200-160514200 Weak transcription Duodenum Mucosa Duodenum
28 chr1:160513200-160514400 Weak transcription Thymus Thymus
29 chr1:160513200-160514600 Weak transcription GM12878-XiMat blood
30 chr1:160513200-160514800 Weak transcription Primary hematopoietic stem cells short term culture blood
31 chr1:160513200-160516000 Weak transcription Primary hematopoietic stem cells blood
32 chr1:160513200-160516800 Weak transcription Fetal Lung lung
33 chr1:160513400-160514400 Weak transcription K562 blood
34 chr1:160513400-160515200 Enhancers Primary T helper naive cells from peripheral blood blood
35 chr1:160513400-160516000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
36 chr1:160513600-160515200 Enhancers Primary T killer naive cells fromperipheralblood blood
37 chr1:160513800-160514200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
38 chr1:160513800-160514600 Enhancers Primary Natural Killer cells fromperipheralblood blood
39 chr1:160513800-160515000 Enhancers Primary T cells fromperipheralblood blood
40 chr1:160513800-160515000 Enhancers Primary T helper cells fromperipheralblood blood
41 chr1:160513800-160515200 Enhancers Primary T cells from cord blood blood
42 chr1:160513800-160516800 Enhancers Primary B cells from peripheral blood blood
43 chr1:160514000-160515000 Enhancers Primary B cells from cord blood blood
44 chr1:160514000-160515000 Enhancers A549 lung

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Last update: Aug 31, 2015