The 2.0 version of rSNPBase

Variant report

Variant rs1572382
Chromosome Location chr1:160545160-160545161
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:35 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:160535400-160547600 Enhancers Primary monocytes fromperipheralblood blood
2 chr1:160536000-160547000 Weak transcription Adipose Nuclei Adipose
3 chr1:160538200-160545400 Enhancers Primary T killer naive cells fromperipheralblood blood
4 chr1:160538200-160546000 Enhancers Primary T helper cells fromperipheralblood blood
5 chr1:160539000-160546800 Enhancers Thymus Thymus
6 chr1:160542400-160548000 Weak transcription Sigmoid Colon Sigmoid Colon
7 chr1:160542800-160548200 Enhancers Fetal Thymus thymus
8 chr1:160543000-160548600 Flanking Active TSS Monocytes-CD14+_RO01746 blood
9 chr1:160543200-160546400 Enhancers Primary T cells from cord blood blood
10 chr1:160543200-160547000 Enhancers Primary B cells from peripheral blood blood
11 chr1:160543400-160548400 Flanking Active TSS Primary T helper cells PMA-I stimulated --
12 chr1:160543600-160545600 Weak transcription Spleen Spleen
13 chr1:160544200-160545200 Flanking Active TSS Primary T helper 17 cells PMA-I stimulated --
14 chr1:160544200-160545200 Flanking Active TSS Primary T cells effector/memory enriched fromperipheralblood blood
15 chr1:160544200-160545800 Enhancers Primary neutrophils fromperipheralblood blood
16 chr1:160544200-160548400 Flanking Active TSS GM12878-XiMat blood
17 chr1:160544400-160546400 Weak transcription Dnd41 blood
18 chr1:160544400-160547200 Enhancers Primary Natural Killer cells fromperipheralblood blood
19 chr1:160544400-160547800 Flanking Active TSS Primary T killer memory cells from peripheral blood blood
20 chr1:160544400-160548000 Enhancers K562 blood
21 chr1:160544600-160545200 Flanking Active TSS Primary hematopoietic stem cells short term culture blood
22 chr1:160544600-160546400 Enhancers Primary mononuclear cells fromperipheralblood Blood
23 chr1:160544600-160548000 Flanking Active TSS Primary T helper memory cells from peripheral blood 1 blood
24 chr1:160544600-160548000 Weak transcription Rectal Mucosa Donor 31 rectum
25 chr1:160544800-160545200 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
26 chr1:160544800-160545400 Flanking Active TSS Primary T helper naive cells fromperipheralblood blood
27 chr1:160544800-160545400 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
28 chr1:160544800-160545800 Flanking Active TSS Primary B cells from cord blood blood
29 chr1:160544800-160546400 Flanking Active TSS Primary T cells fromperipheralblood blood
30 chr1:160544800-160546800 Flanking Active TSS Primary T regulatory cells fromperipheralblood blood
31 chr1:160544800-160549200 Active TSS Rectal Mucosa Donor 29 rectum
32 chr1:160545000-160545400 Enhancers Primary T helper naive cells from peripheral blood blood
33 chr1:160545000-160546200 Enhancers Primary hematopoietic stem cells blood
34 chr1:160545000-160547400 Weak transcription Duodenum Mucosa Duodenum
35 chr1:160545000-160547600 Flanking Active TSS Primary T helper memory cells from peripheral blood 2 blood

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Last update: Aug 31, 2015