The 2.0 version of rSNPBase

Variant report

Variant rs1143631
Chromosome Location chr2:113591593-113591594
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:43 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:113582400-113592000 Weak transcription NH-A brain
2 chr2:113583000-113592200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
3 chr2:113583600-113592000 Weak transcription Osteobl bone
4 chr2:113587600-113593800 Transcr. at gene 5' and 3' Primary hematopoietic stem cells G-CSF-mobilized Male --
5 chr2:113588000-113593600 Transcr. at gene 5' and 3' Primary hematopoietic stem cells G-CSF-mobilized Female --
6 chr2:113588800-113591800 Genic enhancers Primary monocytes fromperipheralblood blood
7 chr2:113589000-113593600 Transcr. at gene 5' and 3' Monocytes-CD14+_RO01746 blood
8 chr2:113589000-113594000 Transcr. at gene 5' and 3' Primary neutrophils fromperipheralblood blood
9 chr2:113589400-113591600 Genic enhancers HMEC breast
10 chr2:113589400-113592200 Weak transcription Pancreas Pancrea
11 chr2:113589600-113591600 Genic enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
12 chr2:113589600-113591800 Weak transcription Stomach Mucosa stomach
13 chr2:113589600-113594800 Weak transcription Esophagus oesophagus
14 chr2:113589800-113591600 Weak transcription Adipose Nuclei Adipose
15 chr2:113590000-113591600 Weak transcription Fetal Adrenal Gland Adrenal Gland
16 chr2:113590000-113591600 Weak transcription HUVEC blood vessel
17 chr2:113590000-113593400 Weak transcription Fetal Muscle Leg muscle
18 chr2:113590000-113594000 Transcr. at gene 5' and 3' NHEK skin
19 chr2:113590200-113591600 Enhancers Primary B cells from cord blood blood
20 chr2:113590200-113591800 Enhancers HepG2 liver
21 chr2:113590200-113593400 Weak transcription Primary B cells from peripheral blood blood
22 chr2:113590400-113591600 Transcr. at gene 5' and 3' Primary hematopoietic stem cells short term culture blood
23 chr2:113590400-113591600 Weak transcription Duodenum Mucosa Duodenum
24 chr2:113590400-113593600 Transcr. at gene 5' and 3' Foreskin Keratinocyte Primary Cells skin03 Skin
25 chr2:113590400-113595200 Enhancers Fetal Intestine Small intestine
26 chr2:113590600-113593000 Weak transcription GM12878-XiMat blood
27 chr2:113590600-113596000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
28 chr2:113590800-113592800 Enhancers Rectal Mucosa Donor 31 rectum
29 chr2:113591000-113591600 Enhancers Sigmoid Colon Sigmoid Colon
30 chr2:113591000-113592200 Weak transcription Spleen Spleen
31 chr2:113591000-113592400 Enhancers Breast Myoepithelial Primary Cells Breast
32 chr2:113591200-113591800 Weak transcription Fetal Muscle Trunk muscle
33 chr2:113591200-113592400 Enhancers Small Intestine intestine
34 chr2:113591200-113592600 Flanking Active TSS Primary hematopoietic stem cells blood
35 chr2:113591200-113593200 Transcr. at gene 5' and 3' Foreskin Keratinocyte Primary Cells skin02 Skin
36 chr2:113591200-113593200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
37 chr2:113591200-113593200 Enhancers Hela-S3 cervix
38 chr2:113591200-113593400 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
39 chr2:113591200-113595000 Enhancers Fetal Intestine Large intestine
40 chr2:113591200-113600200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
41 chr2:113591400-113591800 Enhancers Rectal Mucosa Donor 29 rectum
42 chr2:113591400-113592200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
43 chr2:113591400-113592400 Weak transcription Colonic Mucosa Colon

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Last update: Aug 31, 2015